RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 SLC35E3Q7Z769 313 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 TMEM156Q8N614 296 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 OR10AD1Q8NGE0 317 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 TVP23CQ96ET8 276 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 LRRC61Q9BV99 259 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 PRTFDC1Q9NRG1 225 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 COA3Q9Y2R0 106 aaPredicted RBP13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 SMCO3A2RU48 225 aa13.43□□□□□ -0.26
CLSTN1-205ENST00000477264 RBFOX3A6NFN3 312 aa13.43□□□□□ -0.26
CLSTN1-205ENST00000477264 TGFBR3LH3BV60 316 aa13.43□□□□□ -0.26
CLSTN1-205ENST00000477264 CLDN4O14493 209 aa13.43□□□□□ -0.26
CLSTN1-205ENST00000477264 SOCS1O15524 211 aa13.43□□□□□ -0.26
CLSTN1-205ENST00000477264 LAMTOR5O43504 91 aa13.43□□□□□ -0.26
CLSTN1-205ENST00000477264 SNU13P55769 128 aaKnown RBP13.43□□□□□ -0.26
CLSTN1-205ENST00000477264 SQSTM1Q13501 440 aa13.43□□□□□ -0.26
CLSTN1-205ENST00000477264 OTPQ5XKR4 325 aa13.43□□□□□ -0.26
CLSTN1-205ENST00000477264 SULF2Q8IWU5 870 aa13.43□□□□□ -0.26
CLSTN1-205ENST00000477264 SHISA5Q8N114 240 aa13.43□□□□□ -0.26
CLSTN1-205ENST00000477264 DNASE2BQ8WZ79 361 aa13.43□□□□□ -0.26
CLSTN1-205ENST00000477264 C1orf147Q96MC9 270 aaPredicted RBP13.43□□□□□ -0.26
CLSTN1-205ENST00000477264 GPR61Q9BZJ8 451 aa13.43□□□□□ -0.26
CLSTN1-205ENST00000477264 PTGES2Q9H7Z7 377 aa13.43□□□□□ -0.26
CLSTN1-205ENST00000477264 THADAQ6YHU6 1953 aa13.43□□□□□ -0.26
CLSTN1-205ENST00000477264 DVL1O14640 695 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 TCAPO15273 167 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 HSPB1P04792 205 aaKnown RBP13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 PPP1CCP36873 323 aaKnown RBP13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 GLIPR1P48060 266 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 FOXK1P85037 733 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 FAM213BQ8TBF2 198 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 PATE1Q8WXA2 126 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 RCC1LQ96I51 464 aaKnown RBP13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 SERPINE3A8MV23 424 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 RAMP1O60894 148 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 RAD51DO75771 328 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 CXCL1P09341 107 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 RAB4AP20338 218 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 HNRNPKP61978 463 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 HNF4GQ14541 408 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 CHRFAM7AQ494W8 412 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 OR2T2Q6IF00 324 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 C9orf40Q8IXQ3 194 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 C1orf87Q8N0U7 546 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 CCDC54Q8NEL0 328 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 OR6X1Q8NH79 312 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 STT3BQ8TCJ2 826 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 RNASEH2CQ8TDP1 164 aaKnown RBP13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 LMX1AQ8TE12 382 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 SLC37A2Q8TED4 501 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 PACRGQ96M98 296 aaPredicted RBP13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 NDUFAF3Q9BU61 184 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 PBOV1Q9GZY1 135 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 OR10A2Q9H208 303 aa13.42□□□□□ -0.26
CLSTN1-205ENST00000477264 COL5A1P20908 1838 aaPredicted RBP13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 B4DGG1 531 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 HSD17B6O14756 317 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 SRP19P09132 144 aaKnown RBP13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 GP1BBP13224 206 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 SERPINA2P20848 420 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 APOBEC1P41238 236 aaKnown RBP13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 TMEM50BP56557 158 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 NXPH1P58417 271 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 ZNF266Q14584 549 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 AKR1C8PQ5T2L2 129 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 FAM89BQ8N5H3 189 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 ARHGAP5-AS1Q96IT6 56 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 NIPSNAP3BQ9BS92 247 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 TGIF2Q9GZN2 237 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 WFDC1Q9HC57 220 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 DECR2Q9NUI1 292 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 PITPNC1Q9UKF7 332 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 DNAH14Q0VDD8 3507 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 SPAG17Q6Q759 2223 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 NPIPB13A6NJU9 1138 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 NPIPB4C9JG80 1138 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 PLPP3O14495 311 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 SCGB1D2O95969 90 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 KNG1P01042 644 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 MBPP02686 304 aaPredicted RBP13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 PGCP20142 388 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 DLK1P80370 383 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 HHEXQ03014 270 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 RTN4RL2Q86UN3 420 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 APCDD1LQ8NCL9 501 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 TMEM104Q8NE00 496 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 MRPL24Q96A35 216 aaKnown RBP13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 SLC25A36Q96CQ1 311 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 SLC46A1Q96NT5 459 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 SLC25A31Q9H0C2 315 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 KNL1Q8NG31 2342 aa13.41□□□□□ -0.26
CLSTN1-205ENST00000477264 NSG1A0A0A6YYJ2 146 aa13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 LOC101059948A0A1B0GTJ6 334 aa13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 FTCDNL1E5RQL4 147 aa13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 CYB5BO43169 146 aa13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 NPIPB7O75200 414 aa13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 FABP4P15090 132 aa13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 PVRP15151 417 aa13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 GABRA4P48169 554 aa13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 FHITP49789 147 aa13.4□□□□□ -0.26
CLSTN1-205ENST00000477264 DAP3P51398 398 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms