RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 PRIMA1Q86XR5 153 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 ANGPTL5Q86XS5 388 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 CALHM1Q8IU99 346 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 ZNF676Q8N7Q3 588 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 ZFP41Q8N8Y5 198 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 OR5T2Q8NGG2 359 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 AQP3Q92482 292 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 FGGYQ96C11 551 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 MRPL48Q96GC5 212 aaKnown RBP8.08□□□□□ -1.12
HDAC3-208ENST00000476739 FAHD2AQ96GK7 314 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 ZNF488Q96MN9 340 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 ANKRD60Q9BZ19 345 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 CHST5Q9GZS9 411 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 SMURF1Q9HCE7 757 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 SNTG1Q9NSN8 517 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 PAK1IP1Q9NWT1 392 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-208ENST00000476739 CNOT2Q9NZN8 540 aaKnown RBP8.08□□□□□ -1.12
HDAC3-208ENST00000476739 RSL24D1Q9UHA3 163 aaKnown RBP8.08□□□□□ -1.12
HDAC3-208ENST00000476739 CAB39Q9Y376 341 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-208ENST00000476739 EXOSC1Q9Y3B2 195 aaKnown RBP8.08□□□□□ -1.12
HDAC3-208ENST00000476739 C2CD3Q4AC94 2353 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 WNK2Q9Y3S1 2297 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 SETD2Q9BYW2 2564 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-208ENST00000476739 TRAV38-1A0A0B4J264 116 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 TRAV20A0A0B4J274 112 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 TRBV2A0A0J9YWF9 115 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 FAM230AA0A1W2PPH8 454 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 EFCAB10A6NFE3 127 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 CCDC160A6NGH7 325 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 A8MXK9 166 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 PTGES3LE9PB15 166 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 SLC22A1O15245 554 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 FOXH1O75593 365 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 SELLP14151 372 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 MYL12AP19105 171 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 PAX2Q02962 417 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 CDK5R1Q15078 307 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 CHRFAM7AQ494W8 412 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 ASPHD2Q6ICH7 369 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 TMPRSS11AQ6ZMR5 421 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 STX19Q8N4C7 294 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 OR8B3Q8NGG8 313 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 OR13C3Q8NGS6 347 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 OR10Z1Q8NGY1 313 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 OR5AK2Q8NH90 309 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 RPS4Y2Q8TD47 263 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 NEIL1Q96FI4 390 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-208ENST00000476739 OR8B2Q96RD0 313 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 CCL13Q99616 98 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 SSBP3Q9BWW4 388 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-208ENST00000476739 BEX2Q9BXY8 128 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 TMPRSS13Q9BYE2 586 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 SHARPINQ9H0F6 387 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 BABAM2Q9NXR7 383 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 MIOXQ9UGB7 285 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 HHLA2Q9UM44 414 aa8.07□□□□□ -1.12
HDAC3-208ENST00000476739 POLR3KQ9Y2Y1 108 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-208ENST00000476739 LOC105371242A0A075B767 164 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 TMEM212A6NML5 194 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 C22orf46C9J442 243 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 F8VVB4 439 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 F8VWA3 439 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 J3QT63 122 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 OGG1O15527 345 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 ADAM20O43506 726 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 INMTO95050 263 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 PLATP00750 562 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 CDK1P06493 297 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 CCDC159P0C7I6 412 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 OCM2P0CE71 109 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 OCMP0CE72 109 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-208ENST00000476739 ADRA2CP18825 462 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 ATF1P18846 271 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 GLRA1P23415 457 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 SOX2P48431 317 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 PITPNBP48739 271 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 BCAP31P51572 246 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 GNB2P62879 340 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 MRPL28Q13084 256 aaKnown RBP8.06□□□□□ -1.12
HDAC3-208ENST00000476739 MICBQ29980 383 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 CCDC58Q4VC31 144 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 ESCO2Q56NI9 601 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 WDR25Q64LD2 544 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-208ENST00000476739 STUMQ69YW2 141 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 RPL22L1Q6P5R6 122 aaKnown RBP8.06□□□□□ -1.12
HDAC3-208ENST00000476739 CRIP3Q6Q6R5 217 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 LINC00299Q6ZSB3 139 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 FAM216BQ8N7L0 139 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 NANOGP1Q8N7R0 232 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 CCDC54Q8NEL0 328 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 OR13C5Q8NGS8 318 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 OR52N1Q8NH53 320 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 DACT3Q96B18 629 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-208ENST00000476739 C10orf35Q96D05 121 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 ORAI1Q96D31 301 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 CNBD2Q96M20 576 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 SPACA5Q96QH8 159 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 RBM38Q9H0Z9 239 aaKnown RBP8.06□□□□□ -1.12
HDAC3-208ENST00000476739 OPN4Q9UHM6 478 aa8.06□□□□□ -1.12
HDAC3-208ENST00000476739 CDC42EP3Q9UKI2 254 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms