RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 BORCS8Q96FH0 119 aa8.46□□□□□ -1.06
CCM2-208ENST00000476594 DCTN5Q9BTE1 182 aa8.46□□□□□ -1.06
CCM2-208ENST00000476594 PKIBQ9C010 78 aa8.46□□□□□ -1.06
CCM2-208ENST00000476594 RASSF4Q9H2L5 321 aa8.46□□□□□ -1.06
CCM2-208ENST00000476594 GPR173Q9NS66 373 aa8.46□□□□□ -1.06
CCM2-208ENST00000476594 ACOXLQ9NUZ1 547 aa8.46□□□□□ -1.06
CCM2-208ENST00000476594 RPL36Q9Y3U8 105 aaKnown RBP8.46□□□□□ -1.06
CCM2-208ENST00000476594 IGHV3OR16-10A0A075B7F0 116 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 A0A1B0GTI1 187 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 LOC100130705A0A1B0GUX0 176 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 IRGMA1A4Y4 181 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 TMEM89A2RUT3 159 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 BTBD17A6NE02 478 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.45□□□□□ -1.06
CCM2-208ENST00000476594 SLC16A6O15403 523 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 MAGEB4O15481 346 aaPredicted RBP8.45□□□□□ -1.06
CCM2-208ENST00000476594 NOS1APO75052 506 aaPredicted RBP8.45□□□□□ -1.06
CCM2-208ENST00000476594 CRYBA1P05813 215 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 RNASE1P07998 156 aaKnown RBP8.45□□□□□ -1.06
CCM2-208ENST00000476594 PGA5P0DJD9 388 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 PRKACBP22694 351 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 CCR9P51686 369 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 ATP1B3P54709 279 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 ARF6P62330 175 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 RAB40BQ12829 278 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 IL24Q13007 206 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 TP53I3Q53FA7 332 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 KLHL22Q53GT1 634 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 NCR3LG1Q68D85 454 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 ACP7Q6ZNF0 438 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 SYS1Q8N2H4 156 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 ZNF561Q8N587 486 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 TMEM86BQ8N661 226 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 SETD9Q8NE22 299 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 OR5T2Q8NGG2 359 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 C8orf46Q8TAG6 207 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 RORBQ92753 470 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 LHX4Q969G2 390 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 PPP1R14AQ96A00 147 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 CPNE2Q96FN4 548 aaPredicted RBP8.45□□□□□ -1.06
CCM2-208ENST00000476594 GAFA1Q96PS6 74 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 CHST5Q9GZS9 411 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 COMMD4Q9H0A8 199 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 SIRPDQ9H106 197 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 WDR13Q9H1Z4 485 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 PPP1R3EQ9H7J1 279 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 SMPD3Q9NY59 655 aaPredicted RBP8.45□□□□□ -1.06
CCM2-208ENST00000476594 HHLA2Q9UM44 414 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 FAM96BQ9Y3D0 163 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 PCDHGB5Q9Y5G0 923 aa8.45□□□□□ -1.06
CCM2-208ENST00000476594 IGHV1-69DA0A0B4J2H0 117 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 FAM230AA0A1W2PPH8 454 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 PQLC2LA1A4F0 135 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 J3QLW9 94 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 M0R1W7 72 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 RHBDL1O75783 438 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 IGHV1-69P01742 117 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 ISG15P05161 165 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 CCDC159P0C7I6 412 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 DBTP11182 482 aaKnown RBP8.44□□□□□ -1.06
CCM2-208ENST00000476594 PSG2P11465 335 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 MMP9P14780 707 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 ZNF19P17023 458 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 MPZP25189 248 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 RBP2P50120 134 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 RPL15P61313 204 aaKnown RBP8.44□□□□□ -1.06
CCM2-208ENST00000476594 ISL1P61371 349 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 HOXA4Q00056 320 aaPredicted RBP8.44□□□□□ -1.06
CCM2-208ENST00000476594 ZNF85Q03923 595 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 ZNF91Q05481 1191 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 GALEQ14376 348 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 TTC23Q5W5X9 447 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 FDX2Q6P4F2 183 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 METAP1DQ6UB28 335 aaPredicted RBP8.44□□□□□ -1.06
CCM2-208ENST00000476594 BRD3OSQ6XYD6 125 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 C1orf122Q6ZSJ8 110 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 LHFPL2Q6ZUX7 228 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 VMO1Q7Z5L0 202 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 MKXQ8IYA7 352 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 ENTHD1Q8IYW4 607 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 PACRGLQ8N7B6 248 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 ZNF676Q8N7Q3 588 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 LY6G5BQ8NDX9 201 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 DNAAF1Q8NEP3 725 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 OR5D13Q8NGL4 314 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 OR2G2Q8NGZ5 317 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 TRMT10AQ8TBZ6 339 aaKnown RBP8.44□□□□□ -1.06
CCM2-208ENST00000476594 SSMEM1Q8WWF3 244 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 SPSB1Q96BD6 273 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 SDSLQ96GA7 329 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 TBX15Q96SF7 602 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 FGF23Q9GZV9 251 aaPredicted RBP8.44□□□□□ -1.06
CCM2-208ENST00000476594 VCXQ9H320 206 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 METTL8Q9H825 291 aaKnown RBP8.44□□□□□ -1.06
CCM2-208ENST00000476594 GLS2Q9UI32 602 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 EXOGQ9Y2C4 368 aaKnown RBP8.44□□□□□ -1.06
CCM2-208ENST00000476594 POMT1Q9Y6A1 747 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 ANK2Q01484 3957 aa8.44□□□□□ -1.06
CCM2-208ENST00000476594 CENPVL3A0A0U1RRI6 287 aa8.43□□□□□ -1.06
CCM2-208ENST00000476594 A0A1B0GUS0 222 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms