RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 DUX4L3P0CJ86 424 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 DUX4L4P0CJ87 422 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 DUX4L5P0CJ88 424 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 DUX4L6P0CJ89 424 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 DUX4L7P0CJ90 424 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 ZNF19P17023 458 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 KIR3DL2P43630 455 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 GABRA2P47869 451 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 OR12D2P58182 307 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 LRRC36Q1X8D7 754 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 SMIM21Q3B7S5 101 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 ATPAF1Q5TC12 328 aaPredicted RBP13.38□□□□□ -0.27
COL1A1-205ENST00000476387 TMEM244Q5VVB8 128 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 C16orf87Q6PH81 154 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 DUX4L9Q6RFH8 374 aaPredicted RBP13.38□□□□□ -0.27
COL1A1-205ENST00000476387 OR2G2Q8NGZ5 317 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 ANGPTL6Q8NI99 470 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 TRMT10AQ8TBZ6 339 aaKnown RBP13.38□□□□□ -0.27
COL1A1-205ENST00000476387 MED30Q96HR3 178 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 ALG8Q9BVK2 526 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 ZNF696Q9H7X3 374 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 NOX4Q9NPH5 578 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 C8orf4Q9NR00 106 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 DUX4Q9UBX2 424 aa13.38□□□□□ -0.27
COL1A1-205ENST00000476387 RPUSD1Q9UJJ7 312 aaKnown RBP13.38□□□□□ -0.27
COL1A1-205ENST00000476387 RPL36Q9Y3U8 105 aaKnown RBP13.38□□□□□ -0.27
COL1A1-205ENST00000476387 SOX21Q9Y651 276 aaPredicted RBP13.38□□□□□ -0.27
COL1A1-205ENST00000476387 PQLC2LA1A4F0 135 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 FCN3O75636 299 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 SERPINA3P01011 423 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 RAB40BQ12829 278 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 DEFB112Q30KQ8 113 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 BRD3OSQ6XYD6 125 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 ZNF788Q6ZQV5 615 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 FGFRL1Q8N441 504 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 POC1AQ8NBT0 407 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 NPRL2Q8WTW4 380 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 H1FXQ92522 213 aaKnown RBP13.37□□□□□ -0.27
COL1A1-205ENST00000476387 ZDHHC16Q969W1 377 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 C10orf35Q96D05 121 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 C4orf36Q96KX1 117 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 WDFY2Q96P53 400 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 GAFA1Q96PS6 74 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 CHST5Q9GZS9 411 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 UNKLQ9H9P5 680 aaKnown RBP13.37□□□□□ -0.27
COL1A1-205ENST00000476387 AMBNQ9NP70 447 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 INPP5EQ9NRR6 644 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 RASL12Q9NYN1 266 aa13.37□□□□□ -0.27
COL1A1-205ENST00000476387 SLC25A10Q9UBX3 287 aaPredicted RBP13.37□□□□□ -0.27
COL1A1-205ENST00000476387 MDFIC2A0A1B0GVS7 189 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 FAM230AA0A1W2PPH8 454 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 SIGLEC5O15389 551 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 SYNGR1O43759 233 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 NXPH2O95156 264 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 SFTPBP07988 381 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 PGA5P0DJD9 388 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 SELLP14151 372 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 MMP9P14780 707 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 ZNF20P17024 532 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 TGM4P49221 684 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 ARF6P62330 175 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 GALEQ14376 348 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 CNN3Q15417 329 aaKnown RBP13.36□□□□□ -0.27
COL1A1-205ENST00000476387 KLHL22Q53GT1 634 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 FDX2Q6P4F2 183 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 LHFPL3Q86UP9 236 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 PACRGLQ8N7B6 248 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 CYGBQ8WWM9 190 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 PP6455Q8WZ26 134 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 ONECUT1Q9UBC0 465 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 TRRAPQ9Y4A5 3859 aa13.36□□□□□ -0.27
COL1A1-205ENST00000476387 MEGF8Q7Z7M0 2845 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 HOXA3O43365 443 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-205ENST00000476387 IGHA1P01876 353 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 TFF1P04155 84 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 ACAA1P09110 424 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-205ENST00000476387 PSG2P11465 335 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 NDUFB7P17568 137 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 AMY2BP19961 511 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 PEX2P28328 305 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 CCR9P51686 369 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 PDCD1Q15116 288 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 TTC23Q5W5X9 447 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 LPCAT4Q643R3 524 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 Q6YL49 198 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 ACP7Q6ZNF0 438 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 CMTM4Q8IZR5 234 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 RDH10Q8IZV5 341 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 SYS1Q8N2H4 156 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 TMEM86BQ8N661 226 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 ZNF676Q8N7Q3 588 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 TMEM185AQ8NFB2 350 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 APH1BQ8WW43 257 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 GATAD2BQ8WXI9 593 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 PELI1Q96FA3 418 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 BORCS8Q96FH0 119 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 ZNF488Q96MN9 340 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 TBX15Q96SF7 602 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 DCTN5Q9BTE1 182 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 PKIBQ9C010 78 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms