RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 CADM1Q9BY67 442 aaKnown RBP9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 MROQ9BYG7 248 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ZNF556Q9HAH1 456 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 HES4Q9HCC6 221 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 C19orf12Q9NSK7 152 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 TVP23BQ9NYZ1 205 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 V9GYS6 101 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 A0A0G2JK05 382 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 A0A1W2PQ09 198 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 PQLC2LA1A4F0 135 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 BTBD17A6NE02 478 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 SYNGR1O43759 233 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 PRKYO43930 277 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 FKBP6O75344 327 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 PAHP00439 452 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 NRASP01111 189 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 PRDX2P32119 198 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 DLX6P56179 175 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ERVK11-1P61568 191 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 RPS7P62081 194 aaKnown RBP9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CBX1P83916 185 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 MFGE8Q08431 387 aaPredicted RBP9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 BLMHQ13867 455 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 PTGES3Q15185 160 aaKnown RBP9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 AADACL4Q5VUY2 407 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 HAGHLQ6PII5 290 aaPredicted RBP9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 MOB3CQ70IA8 216 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 THAP5Q7Z6K1 395 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ELMOD2Q8IZ81 293 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ZNF561Q8N587 486 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 OR14K1Q8NGZ2 314 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 FAM81AQ8TBF8 368 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 RORBQ92753 470 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 NRIP2Q9BQI9 281 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 PIGLQ9Y2B2 252 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 TMEM14AQ9Y6G1 99 aa9.95□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 DHRS7CA6NNS2 312 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 VGLL3A8MV65 326 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 H3BUX3 64 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 EBAG9O00559 213 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 DLGAP1O14490 977 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CIB2O75838 187 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 MRPL3P09001 348 aaKnown RBP9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CCL1P22362 96 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 EPHA2P29317 976 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 RIDAP52758 137 aaKnown RBP9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ESRRGP62508 458 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 C2orf68Q2NKX9 166 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 SMIM21Q3B7S5 101 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ZNF829Q3KNS6 432 aaPredicted RBP9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 LCN1P1Q5VSP4 162 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 MEPCEQ7L2J0 689 aaKnown RBP9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 BCDIN3DQ7Z5W3 292 aaKnown RBP9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ZNF573Q86YE8 665 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CALHM1Q8IU99 346 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 TMEM185AQ8NFB2 350 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 UBE2FQ969M7 185 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ZNF488Q96MN9 340 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 TEX12Q9BXU0 123 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 PPA2Q9H2U2 334 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 RANBP3Q9H6Z4 567 aaPredicted RBP9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ADGRL4Q9HBW9 690 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 PAPOLBQ9NRJ5 636 aaKnown RBP9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ENPP5Q9UJA9 477 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 SIGLEC9Q9Y336 463 aa9.94□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 C17orf98A8MV24 154 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 H0YAE9 185 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 J3QT63 122 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 MAGEB4O15481 346 aaPredicted RBP9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ANGPTL7O43827 346 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 PAX6P26367 422 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 GABRA5P31644 462 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 HAAOP46952 286 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ERVFRD-1P60508 538 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 RPL31P62899 125 aaKnown RBP9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 HERPUD1Q15011 391 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 LRRC75BQ2VPJ9 315 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 KIAA2026Q5HYC2 2103 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CLVS2Q5SYC1 327 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 LDLRAD2Q5SZI1 272 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ZNF684Q5T5D7 378 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 C1orf146Q5VVC0 180 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 PLCXD3Q63HM9 321 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 C11orf88Q6PI97 169 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ZNF322Q6U7Q0 402 aaPredicted RBP9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 FAM185AQ8N0U4 392 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 WIPF2Q8TF74 440 aaPredicted RBP9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 MNTQ99583 582 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 APOL4Q9BPW4 351 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 FAM234AQ9H0X4 552 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 HEXA-AS1Q9H8Q6 139 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 MRM2Q9UI43 246 aaKnown RBP9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 R4GMQ9 66 aa9.93□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ANKRD61A6NGH8 418 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ZAR1LA6NP61 321 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 K7N7A8 449 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CHST1O43916 411 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ZNF737O75373 536 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 TK1P04183 234 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CEBPDP49716 269 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms