RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-222ENST00000475580 CLIC3O95833 236 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 PGA5P0DJD9 388 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 ZNF19P17023 458 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 ACTA2P62736 377 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 ACTG2P63267 376 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 RAB40BQ12829 278 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 ZNF691Q5VV52 312 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 ACP7Q6ZNF0 438 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 CALHM1Q8IU99 346 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 PACRGLQ8N7B6 248 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 PNLDC1Q8NA58 520 aaKnown RBP13.67□□□□□ -0.22
VPS8-222ENST00000475580 ZNF555Q8NEP9 628 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 OR52I1Q8NGK6 324 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 OR10AC1Q8NH08 325 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 TMIGD2Q96BF3 282 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 ADAT3Q96EY9 351 aaPredicted RBP13.67□□□□□ -0.22
VPS8-222ENST00000475580 ALG8Q9BVK2 526 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 ISG20L2Q9H9L3 353 aaKnown RBP13.67□□□□□ -0.22
VPS8-222ENST00000475580 PLEKHA1Q9HB21 404 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 ERVK13-1Q9NX77 482 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 MAB21L2Q9Y586 359 aa13.67□□□□□ -0.22
VPS8-222ENST00000475580 NKX6-3A6NJ46 265 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 OR4C45A6NMZ5 311 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 FADS2O95864 444 aaKnown RBP13.66□□□□□ -0.22
VPS8-222ENST00000475580 ISG15P05161 165 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 HTR1AP08908 422 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 ACAA1P09110 424 aaPredicted RBP13.66□□□□□ -0.22
VPS8-222ENST00000475580 CCR9P51686 369 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 IL13RA1P78552 427 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 ADARB1P78563 741 aaKnown RBP13.66□□□□□ -0.22
VPS8-222ENST00000475580 TMEM244Q5VVB8 128 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 ANGPTL5Q86XS5 388 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 SYS1Q8N2H4 156 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 TRMT10AQ8TBZ6 339 aaKnown RBP13.66□□□□□ -0.22
VPS8-222ENST00000475580 NPRL2Q8WTW4 380 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 C10orf35Q96D05 121 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 C1orf147Q96MC9 270 aaPredicted RBP13.66□□□□□ -0.22
VPS8-222ENST00000475580 WDFY2Q96P53 400 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 NRIP2Q9BQI9 281 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 PCGF1Q9BSM1 259 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 DCTN5Q9BTE1 182 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 ADI1Q9BV57 179 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 HES4Q9HCC6 221 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 INPP5EQ9NRR6 644 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 RASL12Q9NYN1 266 aa13.66□□□□□ -0.22
VPS8-222ENST00000475580 RPL36Q9Y3U8 105 aaKnown RBP13.66□□□□□ -0.22
VPS8-222ENST00000475580 IGKV1-9A0A0C4DH69 117 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 FAM230AA0A1W2PPH8 454 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 E9PI62 339 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 CASQ2O14958 399 aaPredicted RBP13.65□□□□□ -0.22
VPS8-222ENST00000475580 GPR37O15354 613 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 TOX4O94842 621 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 ERVK11-1P61568 191 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 ARF6P62330 175 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 ALKBH1Q13686 389 aaKnown RBP13.65□□□□□ -0.22
VPS8-222ENST00000475580 LRRC10Q5BKY1 277 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 OGFRL1Q5TC84 451 aaPredicted RBP13.65□□□□□ -0.22
VPS8-222ENST00000475580 BRD3OSQ6XYD6 125 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 EGFL6Q8IUX8 553 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 CD177Q8N6Q3 437 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 OR51A4Q8NGJ6 313 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 C8orf46Q8TAG6 207 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 CNIH3Q8TBE1 160 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 FAM216AQ8WUB2 273 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 SDSLQ96GA7 329 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 MED30Q96HR3 178 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 JMJD8Q96S16 334 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 JAM3Q9BX67 310 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 PKIBQ9C010 78 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 MS4A7Q9GZW8 240 aaPredicted RBP13.65□□□□□ -0.22
VPS8-222ENST00000475580 CNTD2Q9H8S5 307 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 FGF20Q9NP95 211 aaPredicted RBP13.65□□□□□ -0.22
VPS8-222ENST00000475580 C8orf4Q9NR00 106 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 SLC25A10Q9UBX3 287 aaPredicted RBP13.65□□□□□ -0.22
VPS8-222ENST00000475580 POLDIP2Q9Y2S7 368 aa13.65□□□□□ -0.22
VPS8-222ENST00000475580 CENPVL3A0A0U1RRI6 287 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 TRIM77I1YAP6 450 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 GATBO75879 557 aaKnown RBP13.64□□□□□ -0.23
VPS8-222ENST00000475580 LIMS3P0CW19 117 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 LIMS4P0CW20 117 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 GABRA2P47869 451 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 FUT6P51993 359 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 CAV3P56539 151 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 UBA52P62987 128 aaKnown RBP13.64□□□□□ -0.23
VPS8-222ENST00000475580 IL24Q13007 206 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 SMIM21Q3B7S5 101 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 METTL11BQ5VVY1 283 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 RUSC1-AS1Q66K80 236 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 BATF2Q8N1L9 274 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 ZNRF1Q8ND25 227 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 CYGBQ8WWM9 190 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 PP6455Q8WZ26 134 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 DMRTB1Q96MA1 342 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 ELL3Q9HB65 397 aaPredicted RBP13.64□□□□□ -0.23
VPS8-222ENST00000475580 SLC7A11Q9UPY5 501 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 KPTNQ9Y664 436 aa13.64□□□□□ -0.23
VPS8-222ENST00000475580 MDFIC2A0A1B0GVS7 189 aa13.63□□□□□ -0.23
VPS8-222ENST00000475580 RFPL4AA6NLU0 287 aa13.63□□□□□ -0.23
VPS8-222ENST00000475580 RFPL4AL1F8VTS6 287 aa13.63□□□□□ -0.23
VPS8-222ENST00000475580 F8VVB4 439 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms