RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 NKX6-3A6NJ46 265 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 FAM90A8PA6NJQ4 464 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 SLC22A31A6NKX4 558 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 H3BUX3 64 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 GYG2O15488 501 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 CHST1O43916 411 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF254O75437 659 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 DHRS3O75911 302 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 NRASP01111 189 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 PGA5P0DJD9 388 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 CCL3L1P16619 93 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 POLR2IP36954 125 aaKnown RBP5.7□□□□□ -1.5
HDAC3-207ENST00000475549 HAAOP46952 286 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 RAB13P51153 203 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 DLX6P56179 175 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 CXCR4P61073 352 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 ACSM1Q08AH1 577 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 RIPPLY1Q0D2K3 151 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF273Q14593 569 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 LY6EQ16553 131 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF684Q5T5D7 378 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 ZBTB37Q5TC79 503 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 NCR3LG1Q68D85 454 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 DHRS7BQ6IAN0 325 aaPredicted RBP5.7□□□□□ -1.5
HDAC3-207ENST00000475549 KCTD18Q6PI47 426 aaPredicted RBP5.7□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF322Q6U7Q0 402 aaPredicted RBP5.7□□□□□ -1.5
HDAC3-207ENST00000475549 CCBE1Q6UXH8 406 aaPredicted RBP5.7□□□□□ -1.5
HDAC3-207ENST00000475549 MEPCEQ7L2J0 689 aaKnown RBP5.7□□□□□ -1.5
HDAC3-207ENST00000475549 LHFPL4Q7Z7J7 247 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 ANGPTL5Q86XS5 388 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 C1QL4Q86Z23 238 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 CALHM1Q8IU99 346 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 ELMOD2Q8IZ81 293 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 BATF2Q8N1L9 274 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 TCEANCQ8N8B7 351 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 POC1AQ8NBT0 407 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 TMEM185AQ8NFB2 350 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 OR4M1Q8NGD0 313 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 OR14K1Q8NGZ2 314 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF671Q8TAW3 534 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 FAM110DQ8TAY7 271 aaPredicted RBP5.7□□□□□ -1.5
HDAC3-207ENST00000475549 FAM81AQ8TBF8 368 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 ASB17Q8WXJ9 295 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 NRBF2Q96F24 287 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 IL4I1Q96RQ9 567 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 SSX3Q99909 188 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 CADM1Q9BY67 442 aaKnown RBP5.7□□□□□ -1.5
HDAC3-207ENST00000475549 MEGF9Q9H1U4 602 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 TCF7L1Q9HCS4 588 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 GPR173Q9NS66 373 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 FAM53CQ9NYF3 392 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 RASL12Q9NYN1 266 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 FBLN5Q9UBX5 448 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 SLC22A13Q9Y226 551 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 SF3B6Q9Y3B4 125 aaKnown RBP5.7□□□□□ -1.5
HDAC3-207ENST00000475549 V9GYS6 101 aa5.7□□□□□ -1.5
HDAC3-207ENST00000475549 IGKV1-27A0A075B6S5 117 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 TRBV23-1A0A0A0MS06 115 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 MEX3AA1L020 520 aaKnown RBP5.69□□□□□ -1.5
HDAC3-207ENST00000475549 ANKRD61A6NGH8 418 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 OR5B21A6NL26 309 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 ZAR1LA6NP61 321 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 C17orf98A8MV24 154 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 H0YAE9 185 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 DLGAP1O14490 977 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 TIMM23O14925 209 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 GSC2O15499 205 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 ANGPTL7O43827 346 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF737O75373 536 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 DNAJC8O75937 253 aaPredicted RBP5.69□□□□□ -1.5
HDAC3-207ENST00000475549 PAHP00439 452 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 TK1P04183 234 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 ATP6V1B1P15313 513 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 JUNBP17275 347 aaPredicted RBP5.69□□□□□ -1.5
HDAC3-207ENST00000475549 MPZP25189 248 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 KIR2DS4P43632 304 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 BMXP51813 675 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 RIDAP52758 137 aaKnown RBP5.69□□□□□ -1.5
HDAC3-207ENST00000475549 EFNB2P52799 333 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 RPL31P62899 125 aaKnown RBP5.69□□□□□ -1.5
HDAC3-207ENST00000475549 UBE2V2Q15819 145 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 CLVS2Q5SYC1 327 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 SLX4IPQ5VYV7 408 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 NXNL2Q5VZ03 156 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 PLCXD3Q63HM9 321 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 C12orf73Q69YU5 71 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 KDM4DQ6B0I6 523 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 ASRGL1Q7L266 308 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 TCF23Q7RTU1 214 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 FAM185AQ8N0U4 392 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF561Q8N587 486 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 OR5R1Q8NH85 324 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 OR5K1Q8NHB7 308 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 TMEM163Q8TC26 289 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 LRTOMTQ8WZ04 291 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 CFHR4Q92496 578 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 ITFG2Q969R8 447 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 CNN2Q99439 309 aaKnown RBP5.69□□□□□ -1.5
HDAC3-207ENST00000475549 MTCH1Q9NZJ7 389 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 ENPP5Q9UJA9 477 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms