RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 C8orf4Q9NR00 106 aa19.88■□□□□ 0.77
CPNE1-223ENST00000475146 FRRS1LQ9P0K9 344 aa19.88■□□□□ 0.77
CPNE1-223ENST00000475146 PLATP00750 562 aa19.87■□□□□ 0.77
CPNE1-223ENST00000475146 NANOS3P60323 173 aaKnown RBP19.87■□□□□ 0.77
CPNE1-223ENST00000475146 RAB40BQ12829 278 aa19.87■□□□□ 0.77
CPNE1-223ENST00000475146 GALEQ14376 348 aa19.87■□□□□ 0.77
CPNE1-223ENST00000475146 SMIM21Q3B7S5 101 aa19.87■□□□□ 0.77
CPNE1-223ENST00000475146 GPR157Q5UAW9 335 aa19.87■□□□□ 0.77
CPNE1-223ENST00000475146 FDX2Q6P4F2 183 aa19.87■□□□□ 0.77
CPNE1-223ENST00000475146 OR52I1Q8NGK6 324 aa19.87■□□□□ 0.77
CPNE1-223ENST00000475146 H1FXQ92522 213 aaKnown RBP19.87■□□□□ 0.77
CPNE1-223ENST00000475146 PELI1Q96FA3 418 aa19.87■□□□□ 0.77
CPNE1-223ENST00000475146 WDFY2Q96P53 400 aa19.87■□□□□ 0.77
CPNE1-223ENST00000475146 CHST5Q9GZS9 411 aa19.87■□□□□ 0.77
CPNE1-223ENST00000475146 INPP5EQ9NRR6 644 aa19.87■□□□□ 0.77
CPNE1-223ENST00000475146 RASL12Q9NYN1 266 aa19.87■□□□□ 0.77
CPNE1-223ENST00000475146 SLC25A10Q9UBX3 287 aaPredicted RBP19.87■□□□□ 0.77
CPNE1-223ENST00000475146 DNHD1Q96M86 4753 aa19.87■□□□□ 0.77
CPNE1-223ENST00000475146 GPR37O15354 613 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 SIGLEC5O15389 551 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 CLIC3O95833 236 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 SERPINA3P01011 423 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 IGHA1P01876 353 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 PGA5P0DJD9 388 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 PSG2P11465 335 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 ARF6P62330 175 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 UBE2V2Q15819 145 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 DGUOKQ16854 277 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 ACP7Q6ZNF0 438 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 ANGPTL5Q86XS5 388 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 BATF2Q8N1L9 274 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 PACRGLQ8N7B6 248 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 C10orf35Q96D05 121 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 CNTD2Q9H8S5 307 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 ESM1Q9NQ30 184 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 ERVK13-1Q9NX77 482 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 ONECUT1Q9UBC0 465 aa19.86■□□□□ 0.77
CPNE1-223ENST00000475146 IGKV1D-17A0A075B6S4 117 aa19.85■□□□□ 0.77
CPNE1-223ENST00000475146 NXPH2O95156 264 aa19.85■□□□□ 0.77
CPNE1-223ENST00000475146 ACAA1P09110 424 aaPredicted RBP19.85■□□□□ 0.77
CPNE1-223ENST00000475146 ZNF20P17024 532 aa19.85■□□□□ 0.77
CPNE1-223ENST00000475146 NDUFB7P17568 137 aa19.85■□□□□ 0.77
CPNE1-223ENST00000475146 SMN1Q16637 294 aaKnown RBP19.85■□□□□ 0.77
CPNE1-223ENST00000475146 KLHL22Q53GT1 634 aa19.85■□□□□ 0.77
CPNE1-223ENST00000475146 BRD3OSQ6XYD6 125 aa19.85■□□□□ 0.77
CPNE1-223ENST00000475146 CALHM1Q8IU99 346 aa19.85■□□□□ 0.77
CPNE1-223ENST00000475146 SYS1Q8N2H4 156 aa19.85■□□□□ 0.77
CPNE1-223ENST00000475146 ZDHHC22Q8N966 263 aa19.85■□□□□ 0.77
CPNE1-223ENST00000475146 TMEM185AQ8NFB2 350 aa19.85■□□□□ 0.77
CPNE1-223ENST00000475146 TBX15Q96SF7 602 aa19.85■□□□□ 0.77
CPNE1-223ENST00000475146 ISG20L2Q9H9L3 353 aaKnown RBP19.85■□□□□ 0.77
CPNE1-223ENST00000475146 WBP4O75554 376 aaKnown RBP19.84■□□□□ 0.77
CPNE1-223ENST00000475146 ISG15P05161 165 aa19.84■□□□□ 0.77
CPNE1-223ENST00000475146 MMP9P14780 707 aa19.84■□□□□ 0.77
CPNE1-223ENST00000475146 CCR9P51686 369 aa19.84■□□□□ 0.77
CPNE1-223ENST00000475146 ACTG1P63261 375 aa19.84■□□□□ 0.77
CPNE1-223ENST00000475146 ALKBH1Q13686 389 aaKnown RBP19.84■□□□□ 0.77
CPNE1-223ENST00000475146 CNN3Q15417 329 aaKnown RBP19.84■□□□□ 0.77
CPNE1-223ENST00000475146 ZNF691Q5VV52 312 aa19.84■□□□□ 0.77
CPNE1-223ENST00000475146 TTC23Q5W5X9 447 aa19.84■□□□□ 0.77
CPNE1-223ENST00000475146 ZNF676Q8N7Q3 588 aa19.84■□□□□ 0.77
CPNE1-223ENST00000475146 CNIH3Q8TBE1 160 aa19.84■□□□□ 0.77
CPNE1-223ENST00000475146 PP6455Q8WZ26 134 aa19.84■□□□□ 0.77
CPNE1-223ENST00000475146 ADAT3Q96EY9 351 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-223ENST00000475146 BORCS8Q96FH0 119 aa19.84■□□□□ 0.77
CPNE1-223ENST00000475146 ZNF48Q96MX3 618 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-223ENST00000475146 DCTN5Q9BTE1 182 aa19.84■□□□□ 0.77
CPNE1-223ENST00000475146 PKIBQ9C010 78 aa19.84■□□□□ 0.77
CPNE1-223ENST00000475146 SIRPDQ9H106 197 aa19.84■□□□□ 0.77
CPNE1-223ENST00000475146 MRPS18AQ9NVS2 196 aaKnown RBP19.84■□□□□ 0.77
CPNE1-223ENST00000475146 ZNF222Q9UK12 451 aa19.84■□□□□ 0.77
CPNE1-223ENST00000475146 HHLA2Q9UM44 414 aa19.84■□□□□ 0.77
CPNE1-223ENST00000475146 SOX21Q9Y651 276 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-223ENST00000475146 RFPL4AA6NLU0 287 aa19.83■□□□□ 0.77
CPNE1-223ENST00000475146 RFPL4AL1F8VTS6 287 aa19.83■□□□□ 0.77
CPNE1-223ENST00000475146 MPZP25189 248 aa19.83■□□□□ 0.77
CPNE1-223ENST00000475146 FUT6P51993 359 aa19.83■□□□□ 0.77
CPNE1-223ENST00000475146 CAPZA1P52907 286 aa19.83■□□□□ 0.77
CPNE1-223ENST00000475146 RUSC1-AS1Q66K80 236 aa19.83■□□□□ 0.77
CPNE1-223ENST00000475146 C9orf139Q6ZV77 190 aa19.83■□□□□ 0.77
CPNE1-223ENST00000475146 DHRSXQ8N5I4 330 aa19.83■□□□□ 0.77
CPNE1-223ENST00000475146 ZNRF1Q8ND25 227 aa19.83■□□□□ 0.77
CPNE1-223ENST00000475146 LY6G5BQ8NDX9 201 aa19.83■□□□□ 0.77
CPNE1-223ENST00000475146 SETD9Q8NE22 299 aa19.83■□□□□ 0.77
CPNE1-223ENST00000475146 OR13C3Q8NGS6 347 aa19.83■□□□□ 0.77
CPNE1-223ENST00000475146 FAM216AQ8WUB2 273 aa19.83■□□□□ 0.77
CPNE1-223ENST00000475146 FGGYQ96C11 551 aa19.83■□□□□ 0.77
CPNE1-223ENST00000475146 DUX5Q96PT3 197 aa19.83■□□□□ 0.77
CPNE1-223ENST00000475146 NRIP2Q9BQI9 281 aa19.83■□□□□ 0.77
CPNE1-223ENST00000475146 OR4C45A6NMZ5 311 aa19.82■□□□□ 0.76
CPNE1-223ENST00000475146 NOS1APO75052 506 aaPredicted RBP19.82■□□□□ 0.76
CPNE1-223ENST00000475146 CAV3P56539 151 aa19.82■□□□□ 0.76
CPNE1-223ENST00000475146 UBA52P62987 128 aaKnown RBP19.82■□□□□ 0.76
CPNE1-223ENST00000475146 IL24Q13007 206 aa19.82■□□□□ 0.76
CPNE1-223ENST00000475146 BAMBIQ13145 260 aa19.82■□□□□ 0.76
CPNE1-223ENST00000475146 PDCD1Q15116 288 aa19.82■□□□□ 0.76
CPNE1-223ENST00000475146 TUSC1Q2TAM9 212 aa19.82■□□□□ 0.76
CPNE1-223ENST00000475146 CMTM4Q8IZR5 234 aa19.82■□□□□ 0.76
CPNE1-223ENST00000475146 OR10AC1Q8NH08 325 aa19.82■□□□□ 0.76
CPNE1-223ENST00000475146 LHX4Q969G2 390 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms