RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 TUBG1P23258 451 aa18.8■□□□□ 0.6
CCM2-206ENST00000474617 UBE2NP61088 152 aaKnown RBP18.8■□□□□ 0.6
CCM2-206ENST00000474617 PMP22Q01453 160 aa18.8■□□□□ 0.6
CCM2-206ENST00000474617 NHLRC3Q5JS37 347 aa18.8■□□□□ 0.6
CCM2-206ENST00000474617 LIN54Q6MZP7 749 aa18.8■□□□□ 0.6
CCM2-206ENST00000474617 RPUSD3Q6P087 351 aaKnown RBP18.8■□□□□ 0.6
CCM2-206ENST00000474617 INO80CQ6PI98 192 aaPredicted RBP18.8■□□□□ 0.6
CCM2-206ENST00000474617 OR5A2Q8NGI9 324 aa18.8■□□□□ 0.6
CCM2-206ENST00000474617 TUBG2Q9NRH3 451 aa18.8■□□□□ 0.6
CCM2-206ENST00000474617 IGKV1-27A0A075B6S5 117 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 OR5B21A6NL26 309 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 F5H5P2 479 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 SMLR1H3BR10 107 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 RAD51DO75771 328 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 CRHP06850 196 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 CCNOP22674 350 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 PTGER4P35408 488 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 FOXG1P55316 489 aaPredicted RBP18.79■□□□□ 0.6
CCM2-206ENST00000474617 FGL1Q08830 312 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 NKPD1Q17RQ9 610 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 MICBQ29980 383 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 ELP2Q6IA86 826 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 OR52W1Q6IF63 320 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 UNQ6126/PRO20091Q6UXV3 157 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 TMED4Q7Z7H5 227 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 LYG2Q86SG7 212 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 SLC30A7Q8NEW0 376 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 OR5AP2Q8NGF4 316 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 OR56B2PQ8NGI1 322 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 TRIB1Q96RU8 372 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 PAPOLGQ9BWT3 736 aaKnown RBP18.79■□□□□ 0.6
CCM2-206ENST00000474617 OBP2BQ9NPH6 170 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 PLSCR3Q9NRY6 295 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 PIPOXQ9P0Z9 390 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 ARHGAP21Q5T5U3 1957 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 FPR2P25090 351 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 SNU13P55769 128 aaKnown RBP18.79■□□□□ 0.6
CCM2-206ENST00000474617 PRDX4Q13162 271 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 LINC00596Q86U02 117 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 MKXQ8IYA7 352 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 TMEM185AQ8NFB2 350 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 OR10K1Q8NGX5 313 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 EMG1Q92979 244 aaKnown RBP18.79■□□□□ 0.6
CCM2-206ENST00000474617 DHRS9Q9BPW9 319 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 PLK3Q9H4B4 646 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 OPN4Q9UHM6 478 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 LHX6Q9UPM6 363 aa18.79■□□□□ 0.6
CCM2-206ENST00000474617 ZNF292O60281 2723 aa18.78■□□□□ 0.6
CCM2-206ENST00000474617 ANKRD30BLA7E2S9 258 aa18.78■□□□□ 0.6
CCM2-206ENST00000474617 ZNF850A8MQ14 1090 aa18.78■□□□□ 0.6
CCM2-206ENST00000474617 HMSDA8MTL9 139 aa18.78■□□□□ 0.6
CCM2-206ENST00000474617 TPOP07202 933 aa18.78■□□□□ 0.6
CCM2-206ENST00000474617 TSPAN5P62079 268 aa18.78■□□□□ 0.6
CCM2-206ENST00000474617 SRSF4Q08170 494 aaKnown RBP18.78■□□□□ 0.6
CCM2-206ENST00000474617 DHRS2Q13268 280 aa18.78■□□□□ 0.6
CCM2-206ENST00000474617 CHRFAM7AQ494W8 412 aa18.78■□□□□ 0.6
CCM2-206ENST00000474617 C1QTNF12Q5T7M4 302 aa18.78■□□□□ 0.6
CCM2-206ENST00000474617 C11orf88Q6PI97 169 aa18.78■□□□□ 0.6
CCM2-206ENST00000474617 C1orf174Q8IYL3 243 aa18.78■□□□□ 0.6
CCM2-206ENST00000474617 C17orf78Q8N4C9 275 aa18.78■□□□□ 0.6
CCM2-206ENST00000474617 OR51F2Q8NH61 342 aa18.78■□□□□ 0.6
CCM2-206ENST00000474617 PHB2Q99623 299 aa18.78■□□□□ 0.6
CCM2-206ENST00000474617 VSIG4Q9Y279 399 aa18.78■□□□□ 0.6
CCM2-206ENST00000474617 BOLA1Q9Y3E2 137 aa18.78■□□□□ 0.6
CCM2-206ENST00000474617 TNRC6AQ8NDV7 1962 aaKnown RBP18.78■□□□□ 0.6
CCM2-206ENST00000474617 ZNF503-AS2A6NEH8 195 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 FIGNL2A6NMB9 653 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 SLC22A5O76082 557 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 HLA-AP01891 365 aaKnown RBP18.77■□□□□ 0.6
CCM2-206ENST00000474617 CRYABP02511 175 aaKnown RBP18.77■□□□□ 0.6
CCM2-206ENST00000474617 PMP2P02689 132 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 S100A1P23297 94 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 GABRR1P24046 479 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 ZBTB25P24278 435 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 CHATP28329 748 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 CD34P28906 385 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 HIKESHIQ53FT3 197 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 Q6ZS92 163 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 LHFPL1Q86WI0 220 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 UXS1Q8NBZ7 420 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 OR52B4Q8NGK2 314 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 MITD1Q8WV92 249 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 WBP1Q96G27 269 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 ZNF75AQ96N20 296 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 PPA2Q9H2U2 334 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 CA10Q9NS85 328 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 STARD10Q9Y365 291 aa18.77■□□□□ 0.6
CCM2-206ENST00000474617 A0A0B4J2A0 478 aa18.76■□□□□ 0.59
CCM2-206ENST00000474617 CD300LBA8K4G0 201 aa18.76■□□□□ 0.59
CCM2-206ENST00000474617 PDCD6O75340 191 aa18.76■□□□□ 0.59
CCM2-206ENST00000474617 DUS4LO95620 317 aaKnown RBP18.76■□□□□ 0.59
CCM2-206ENST00000474617 CSN2P05814 226 aa18.76■□□□□ 0.59
CCM2-206ENST00000474617 SELEP16581 610 aa18.76■□□□□ 0.59
CCM2-206ENST00000474617 COX5AP20674 150 aa18.76■□□□□ 0.59
CCM2-206ENST00000474617 HOXC12P31275 282 aa18.76■□□□□ 0.59
CCM2-206ENST00000474617 RBM11P57052 281 aaKnown RBP18.76■□□□□ 0.59
CCM2-206ENST00000474617 SRSF7Q16629 238 aaKnown RBP eCLIP18.76■□□□□ 0.59
CCM2-206ENST00000474617 ACSF3Q4G176 576 aaPredicted RBP18.76■□□□□ 0.59
CCM2-206ENST00000474617 TMEM128Q5BJH2 165 aa18.76■□□□□ 0.59
CCM2-206ENST00000474617 FBXW12Q6X9E4 464 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms