RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 VPREB3Q9UKI3 123 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 OR52A1Q9UKL2 312 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 SF3B6Q9Y3B4 125 aaKnown RBP16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 MAB21L2Q9Y586 359 aa16.68■□□□□ 0.26
PDLIM4-206ENST00000474421 H0YAE9 185 aa16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 J3QT63 122 aa16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 TIMM23O14925 209 aa16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 MITFO75030 526 aaPredicted RBP16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 SRSF10O75494 262 aaKnown RBP16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 SAA4P35542 130 aa16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 KLRD1Q13241 179 aa16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 TAF9Q16594 264 aa16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 TMEM42Q69YG0 159 aa16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 DHRS7BQ6IAN0 325 aaPredicted RBP16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 ACP7Q6ZNF0 438 aa16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 BCDIN3DQ7Z5W3 292 aaKnown RBP16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 ZNF561Q8N587 486 aa16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 LINC01006Q8NI28 216 aa16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 PPP1R14AQ96A00 147 aa16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 SEMA6AQ9H2E6 1030 aa16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 AP4S1Q9Y587 144 aa16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 V9GYS6 101 aa16.67■□□□□ 0.26
PDLIM4-206ENST00000474421 RFPL4AA6NLU0 287 aa16.66■□□□□ 0.26
PDLIM4-206ENST00000474421 RFPL4AL1F8VTS6 287 aa16.66■□□□□ 0.26
PDLIM4-206ENST00000474421 M0QZ24 198 aa16.66■□□□□ 0.26
PDLIM4-206ENST00000474421 SLC1A7O00341 560 aa16.66■□□□□ 0.26
PDLIM4-206ENST00000474421 NOS1APO75052 506 aaPredicted RBP16.66■□□□□ 0.26
PDLIM4-206ENST00000474421 ATP5HO75947 161 aa16.66■□□□□ 0.26
PDLIM4-206ENST00000474421 CLPXO76031 633 aa16.66■□□□□ 0.26
PDLIM4-206ENST00000474421 PGA5P0DJD9 388 aa16.66■□□□□ 0.26
PDLIM4-206ENST00000474421 HAAOP46952 286 aa16.66■□□□□ 0.26
PDLIM4-206ENST00000474421 PRB3Q04118 309 aaPredicted RBP16.66■□□□□ 0.26
PDLIM4-206ENST00000474421 MIDNQ504T8 468 aa16.66■□□□□ 0.26
PDLIM4-206ENST00000474421 DMRTC1Q5HYR2 192 aa16.66■□□□□ 0.26
PDLIM4-206ENST00000474421 FAM185AQ8N0U4 392 aa16.66■□□□□ 0.26
PDLIM4-206ENST00000474421 IL4I1Q96RQ9 567 aa16.66■□□□□ 0.26
PDLIM4-206ENST00000474421 WARS2Q9UGM6 360 aaKnown RBP16.66■□□□□ 0.26
PDLIM4-206ENST00000474421 A0A1W2PRD5 423 aa16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 A0A1W2PRF3 423 aa16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 A0A1W2PRM7 423 aa16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 M0R129 80 aa16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 KRT8P05787 483 aa16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 EPHA2P29317 976 aa16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 TGFBR2P37173 567 aa16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 DLX1P56177 255 aa16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 SRSF4Q08170 494 aaKnown RBP16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 C1orf146Q5VVC0 180 aa16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 Q6ZSR3 168 aa16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 OR14K1Q8NGZ2 314 aa16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 FAM234AQ9H0X4 552 aa16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 C16orf95Q9H693 158 aa16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 ELL3Q9HB65 397 aaPredicted RBP16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 GPR173Q9NS66 373 aa16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 MRM2Q9UI43 246 aaKnown RBP16.65■□□□□ 0.26
PDLIM4-206ENST00000474421 WNK1Q9H4A3 2382 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 hCG_1809904A0A1W2PP81 198 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 A0A1W2PPE2 198 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 A0A1W2PR64 198 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 A0A1W2PRV1 198 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 PQLC2LA1A4F0 135 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 SYNGR1O43759 233 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 NXPH2O95156 264 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 OR2T7P0C7T2 308 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 PRDX2P32119 198 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 PROK1P58294 105 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 RPL31P62899 125 aaKnown RBP16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 Q6ZSV7 163 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 ASRGL1Q7L266 308 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 BEND2Q8NDZ0 799 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 OR51G2Q8NGK0 314 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 OR2T27Q8NH04 317 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 NRIP2Q9BQI9 281 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 CMYA5Q8N3K9 4069 aa16.64■□□□□ 0.25
PDLIM4-206ENST00000474421 A0A1B0GTI1 187 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 MAGEB4O15481 346 aaPredicted RBP16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 ANGPTL7O43827 346 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 TSPAN9O75954 239 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 CCL1P22362 96 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 MPZP25189 248 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 HTR1FP30939 366 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 PLEKHG7Q6ZR37 379 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 AMIGO2Q86SJ2 522 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 PNKDQ8N490 385 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 CD177Q8N6Q3 437 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 YIPF7Q8N8F6 280 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 CCDC54Q8NEL0 328 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 ZNF488Q96MN9 340 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 CIB1Q99828 191 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 PKIBQ9C010 78 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 HEXA-AS1Q9H8Q6 139 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 PLEKHA1Q9HB21 404 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 C19orf12Q9NSK7 152 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 SLC7A11Q9UPY5 501 aa16.63■□□□□ 0.25
PDLIM4-206ENST00000474421 ANKRD61A6NGH8 418 aa16.62■□□□□ 0.25
PDLIM4-206ENST00000474421 SULT1C4O75897 302 aa16.62■□□□□ 0.25
PDLIM4-206ENST00000474421 RPP14O95059 124 aaKnown RBP16.62■□□□□ 0.25
PDLIM4-206ENST00000474421 TMED1Q13445 227 aa16.62■□□□□ 0.25
PDLIM4-206ENST00000474421 ADI1Q9BV57 179 aa16.62■□□□□ 0.25
PDLIM4-206ENST00000474421 OSBPL10Q9BXB5 764 aa16.62■□□□□ 0.25
PDLIM4-206ENST00000474421 MMP27Q9H306 513 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms