RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 TRAV38-1A0A0B4J264 116 aa15.03■□□□□ -0
SNX4-204ENST00000473417 FAM230AA0A1W2PPH8 454 aa15.03■□□□□ -0
SNX4-204ENST00000473417 AKR7A2O43488 359 aa15.03■□□□□ -0
SNX4-204ENST00000473417 RHBDL1O75783 438 aa15.03■□□□□ -0
SNX4-204ENST00000473417 GATBO75879 557 aaKnown RBP15.03■□□□□ -0
SNX4-204ENST00000473417 LALBAP00709 142 aa15.03■□□□□ -0
SNX4-204ENST00000473417 CDK1P06493 297 aa15.03■□□□□ -0
SNX4-204ENST00000473417 WNT2P09544 360 aa15.03■□□□□ -0
SNX4-204ENST00000473417 RPS2P15880 293 aaKnown RBP15.03■□□□□ -0
SNX4-204ENST00000473417 ZNF20P17024 532 aa15.03■□□□□ -0
SNX4-204ENST00000473417 CPT2P23786 658 aa15.03■□□□□ -0
SNX4-204ENST00000473417 ACTG1P63261 375 aa15.03■□□□□ -0
SNX4-204ENST00000473417 CDK5R1Q15078 307 aa15.03■□□□□ -0
SNX4-204ENST00000473417 CCDC58Q4VC31 144 aa15.03■□□□□ -0
SNX4-204ENST00000473417 LYPD2Q6UXB3 125 aa15.03■□□□□ -0
SNX4-204ENST00000473417 SGCDQ92629 289 aa15.03■□□□□ -0
SNX4-204ENST00000473417 MYDGFQ969H8 173 aa15.03■□□□□ -0
SNX4-204ENST00000473417 C10orf35Q96D05 121 aa15.03■□□□□ -0
SNX4-204ENST00000473417 SEH1LQ96EE3 360 aa15.03■□□□□ -0
SNX4-204ENST00000473417 OR5V1Q9UGF6 321 aa15.03■□□□□ -0
SNX4-204ENST00000473417 SLC7A11Q9UPY5 501 aa15.03■□□□□ -0
SNX4-204ENST00000473417 PCDHGB5Q9Y5G0 923 aa15.03■□□□□ -0
SNX4-204ENST00000473417 PQLC2LA1A4F0 135 aa15.02■□□□□ -0
SNX4-204ENST00000473417 MYL12BO14950 172 aa15.02■□□□□ -0
SNX4-204ENST00000473417 GYPAP02724 150 aa15.02■□□□□ -0
SNX4-204ENST00000473417 FPR2P25090 351 aa15.02■□□□□ -0
SNX4-204ENST00000473417 CFHR2P36980 270 aa15.02■□□□□ -0
SNX4-204ENST00000473417 HAAOP46952 286 aa15.02■□□□□ -0
SNX4-204ENST00000473417 COMPP49747 757 aaPredicted RBP15.02■□□□□ -0
SNX4-204ENST00000473417 PAX2Q02962 417 aa15.02■□□□□ -0
SNX4-204ENST00000473417 ARMCX4Q5H9R4 360 aa15.02■□□□□ -0
SNX4-204ENST00000473417 KLF17Q5JT82 389 aaPredicted RBP15.02■□□□□ -0
SNX4-204ENST00000473417 DCDC5Q6ZRR9 648 aa15.02■□□□□ -0
SNX4-204ENST00000473417 ZFP41Q8N8Y5 198 aa15.02■□□□□ -0
SNX4-204ENST00000473417 ZDHHC22Q8N966 263 aa15.02■□□□□ -0
SNX4-204ENST00000473417 ZNF485Q8NCK3 441 aa15.02■□□□□ -0
SNX4-204ENST00000473417 OR10Z1Q8NGY1 313 aa15.02■□□□□ -0
SNX4-204ENST00000473417 C22orf15Q8WYQ4 148 aa15.02■□□□□ -0
SNX4-204ENST00000473417 PP6455Q8WZ26 134 aa15.02■□□□□ -0
SNX4-204ENST00000473417 AQP3Q92482 292 aa15.02■□□□□ -0
SNX4-204ENST00000473417 MRI1Q9BV20 369 aa15.02■□□□□ -0
SNX4-204ENST00000473417 SSBP3Q9BWW4 388 aaPredicted RBP15.02■□□□□ -0
SNX4-204ENST00000473417 TRIM36Q9NQ86 728 aa15.02■□□□□ -0
SNX4-204ENST00000473417 PAK1IP1Q9NWT1 392 aaPredicted RBP15.02■□□□□ -0
SNX4-204ENST00000473417 MIOXQ9UGB7 285 aa15.02■□□□□ -0
SNX4-204ENST00000473417 TPRKBQ9Y3C4 175 aa15.02■□□□□ -0
SNX4-204ENST00000473417 AUP1Q9Y679 476 aa15.02■□□□□ -0
SNX4-204ENST00000473417 TMEM89A2RUT3 159 aa15.01□□□□□ -0.01
SNX4-204ENST00000473417 SRRM5B3KS81 715 aa15.01□□□□□ -0.01
SNX4-204ENST00000473417 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.01□□□□□ -0.01
SNX4-204ENST00000473417 OGG1O15527 345 aa15.01□□□□□ -0.01
SNX4-204ENST00000473417 KCNJ8Q15842 424 aa15.01□□□□□ -0.01
SNX4-204ENST00000473417 TEX36Q5VZQ5 186 aa15.01□□□□□ -0.01
SNX4-204ENST00000473417 ANGPTL5Q86XS5 388 aa15.01□□□□□ -0.01
SNX4-204ENST00000473417 FAM90A1Q86YD7 464 aa15.01□□□□□ -0.01
SNX4-204ENST00000473417 ZNF573Q86YE8 665 aa15.01□□□□□ -0.01
SNX4-204ENST00000473417 NANOGP1Q8N7R0 232 aa15.01□□□□□ -0.01
SNX4-204ENST00000473417 ZNF671Q8TAW3 534 aa15.01□□□□□ -0.01
SNX4-204ENST00000473417 TSEN15Q8WW01 171 aaKnown RBP15.01□□□□□ -0.01
SNX4-204ENST00000473417 DACT3Q96B18 629 aaPredicted RBP15.01□□□□□ -0.01
SNX4-204ENST00000473417 NEIL1Q96FI4 390 aaPredicted RBP15.01□□□□□ -0.01
SNX4-204ENST00000473417 ZNF184Q99676 751 aaPredicted RBP15.01□□□□□ -0.01
SNX4-204ENST00000473417 WDR13Q9H1Z4 485 aa15.01□□□□□ -0.01
SNX4-204ENST00000473417 SNTG1Q9NSN8 517 aa15.01□□□□□ -0.01
SNX4-204ENST00000473417 NUP50Q9UKX7 468 aa15.01□□□□□ -0.01
SNX4-204ENST00000473417 DHDHQ9UQ10 334 aa15.01□□□□□ -0.01
SNX4-204ENST00000473417 ERGIC3Q9Y282 383 aa15.01□□□□□ -0.01
SNX4-204ENST00000473417 IGKV1-9A0A0C4DH69 117 aa15□□□□□ -0.01
SNX4-204ENST00000473417 SYNGR1O43759 233 aa15□□□□□ -0.01
SNX4-204ENST00000473417 RRP9O43818 475 aaKnown RBP15□□□□□ -0.01
SNX4-204ENST00000473417 RPSAP08865 295 aaKnown RBP15□□□□□ -0.01
SNX4-204ENST00000473417 ATF1P18846 271 aa15□□□□□ -0.01
SNX4-204ENST00000473417 CFPP27918 469 aa15□□□□□ -0.01
SNX4-204ENST00000473417 SOX2P48431 317 aa15□□□□□ -0.01
SNX4-204ENST00000473417 FUT6P51993 359 aa15□□□□□ -0.01
SNX4-204ENST00000473417 WNT4P56705 351 aa15□□□□□ -0.01
SNX4-204ENST00000473417 CNN3Q15417 329 aaKnown RBP15□□□□□ -0.01
SNX4-204ENST00000473417 MICBQ29980 383 aa15□□□□□ -0.01
SNX4-204ENST00000473417 NLRC3Q7RTR2 1065 aa15□□□□□ -0.01
SNX4-204ENST00000473417 OR5T2Q8NGG2 359 aa15□□□□□ -0.01
SNX4-204ENST00000473417 OR8B3Q8NGG8 313 aa15□□□□□ -0.01
SNX4-204ENST00000473417 RPS4Y2Q8TD47 263 aa15□□□□□ -0.01
SNX4-204ENST00000473417 RGP1Q92546 391 aaPredicted RBP15□□□□□ -0.01
SNX4-204ENST00000473417 BORCS8Q96FH0 119 aa15□□□□□ -0.01
SNX4-204ENST00000473417 TECTBQ96PL2 329 aa15□□□□□ -0.01
SNX4-204ENST00000473417 OR8B2Q96RD0 313 aa15□□□□□ -0.01
SNX4-204ENST00000473417 DNAJB11Q9UBS4 358 aa15□□□□□ -0.01
SNX4-204ENST00000473417 PNMA8CA0A1B0GUJ8 204 aa14.99□□□□□ -0.01
SNX4-204ENST00000473417 J3QT63 122 aa14.99□□□□□ -0.01
SNX4-204ENST00000473417 TNFRSF13BO14836 293 aaPredicted RBP14.99□□□□□ -0.01
SNX4-204ENST00000473417 ADAM20O43506 726 aa14.99□□□□□ -0.01
SNX4-204ENST00000473417 OCM2P0CE71 109 aa14.99□□□□□ -0.01
SNX4-204ENST00000473417 OCMP0CE72 109 aaPredicted RBP14.99□□□□□ -0.01
SNX4-204ENST00000473417 MUC1P15941 1255 aaPredicted RBP14.99□□□□□ -0.01
SNX4-204ENST00000473417 GLRA1P23415 457 aa14.99□□□□□ -0.01
SNX4-204ENST00000473417 PITPNBP48739 271 aa14.99□□□□□ -0.01
SNX4-204ENST00000473417 GNB2P62879 340 aa14.99□□□□□ -0.01
SNX4-204ENST00000473417 UBA52P62987 128 aaKnown RBP14.99□□□□□ -0.01
SNX4-204ENST00000473417 SLC35A2P78381 396 aa14.99□□□□□ -0.01
SNX4-204ENST00000473417 PAX8Q06710 450 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms