RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 SMCO4Q9NRQ5 59 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 ATPIF1Q9UII2 106 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 B3GALT1Q9Y5Z6 326 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 JTBO76095 146 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 PNLIPP16233 465 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 CPT2P23786 658 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 HABP2Q14520 560 aaPredicted RBP18.45■□□□□ 0.54
COL18A1-207ENST00000473212 C14orf79Q96F83 325 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 CLCC1Q96S66 551 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 TM2D1Q9BX74 207 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 PLEKHJ1Q9NW61 149 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 PIGLQ9Y2B2 252 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 AMDHD2Q9Y303 409 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 AQP7P3A6NL99 342 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 DHRS3O75911 302 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 IGLV3-1P01715 115 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 THBS4P35443 961 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 SWI5Q1ZZU3 235 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 OR5L2Q8NGL0 311 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 SLC39A7Q92504 469 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 PHF7Q9BWX1 381 aaPredicted RBP18.45■□□□□ 0.54
COL18A1-207ENST00000473212 DEFB126Q9BYW3 111 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 OCIAD1Q9NX40 245 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 CACFD1Q9UGQ2 172 aa18.45■□□□□ 0.54
COL18A1-207ENST00000473212 CHCHD2Q9Y6H1 151 aaPredicted RBP18.45■□□□□ 0.54
COL18A1-207ENST00000473212 FRYQ5TBA9 3013 aa18.44■□□□□ 0.54
COL18A1-207ENST00000473212 PPT1P50897 306 aa18.44■□□□□ 0.54
COL18A1-207ENST00000473212 ERGIC1Q969X5 290 aa18.44■□□□□ 0.54
COL18A1-207ENST00000473212 TUBD1Q9UJT1 453 aa18.44■□□□□ 0.54
COL18A1-207ENST00000473212 IGLV3-32A0A0A0MS00 114 aa18.44■□□□□ 0.54
COL18A1-207ENST00000473212 IGHV5-10-1A0A0J9YXX1 117 aa18.44■□□□□ 0.54
COL18A1-207ENST00000473212 EIF3GO75821 320 aaKnown RBP eCLIP18.44■□□□□ 0.54
COL18A1-207ENST00000473212 DKK1O94907 266 aa18.44■□□□□ 0.54
COL18A1-207ENST00000473212 GAPDHP04406 335 aaKnown RBP18.44■□□□□ 0.54
COL18A1-207ENST00000473212 IFNA4P05014 189 aa18.44■□□□□ 0.54
COL18A1-207ENST00000473212 SNRPEP62304 92 aaKnown RBP18.44■□□□□ 0.54
COL18A1-207ENST00000473212 ENDOGQ14249 297 aaKnown RBP18.44■□□□□ 0.54
COL18A1-207ENST00000473212 SLC16A14Q7RTX9 510 aa18.44■□□□□ 0.54
COL18A1-207ENST00000473212 BSCL2Q96G97 398 aaPredicted RBP18.44■□□□□ 0.54
COL18A1-207ENST00000473212 RARRES3Q9UL19 164 aa18.44■□□□□ 0.54
COL18A1-207ENST00000473212 V9GYS6 101 aa18.44■□□□□ 0.54
COL18A1-207ENST00000473212 LY6G6EA0A0G2JKS1 128 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 CRYM-AS1A6NIL9 109 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 ANGPTL7O43827 346 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 IFNA21P01568 189 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 CTSDP07339 412 aaPredicted RBP18.43■□□□□ 0.54
COL18A1-207ENST00000473212 SNAI3Q3KNW1 292 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 OR9K2Q8NGE7 335 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 OR2AE1Q8NHA4 323 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 HAS2Q92819 552 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 PADI1Q9ULC6 663 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 U3KQA8 63 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 SHANK1Q9Y566 2161 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 TLX3O43711 291 aaPredicted RBP18.43■□□□□ 0.54
COL18A1-207ENST00000473212 APOC1P02654 83 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 CTSSP25774 331 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 GUCA1AP43080 201 aaPredicted RBP18.43■□□□□ 0.54
COL18A1-207ENST00000473212 RAB5BP61020 215 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 OPN5Q6U736 354 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 DNASE2BQ8WZ79 361 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 DYRK2Q92630 601 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 JSRP1Q96MG2 331 aaPredicted RBP18.43■□□□□ 0.54
COL18A1-207ENST00000473212 RBM24Q9BX46 236 aaKnown RBP18.43■□□□□ 0.54
COL18A1-207ENST00000473212 CHST5Q9GZS9 411 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 LIME1Q9H400 295 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 RNF122Q9H9V4 155 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 RPS10P5Q9NQ39 176 aa18.43■□□□□ 0.54
COL18A1-207ENST00000473212 TMEM225BP0DP42 221 aa18.42■□□□□ 0.54
COL18A1-207ENST00000473212 MSR1P21757 451 aa18.42■□□□□ 0.54
COL18A1-207ENST00000473212 RRADP55042 308 aa18.42■□□□□ 0.54
COL18A1-207ENST00000473212 SP6Q3SY56 376 aa18.42■□□□□ 0.54
COL18A1-207ENST00000473212 BRICD5Q6PL45 260 aa18.42■□□□□ 0.54
COL18A1-207ENST00000473212 C20orf196Q8IYI0 205 aa18.42■□□□□ 0.54
COL18A1-207ENST00000473212 CCDC74BQ96LY2 380 aa18.42■□□□□ 0.54
COL18A1-207ENST00000473212 PIGQQ9BRB3 760 aa18.42■□□□□ 0.54
COL18A1-207ENST00000473212 POMT1Q9Y6A1 747 aa18.42■□□□□ 0.54
COL18A1-207ENST00000473212 CD63P08962 238 aa18.42■□□□□ 0.54
COL18A1-207ENST00000473212 LSM6P62312 80 aaKnown RBP18.42■□□□□ 0.54
COL18A1-207ENST00000473212 FAM3AP98173 230 aa18.42■□□□□ 0.54
COL18A1-207ENST00000473212 RPUSD3Q6P087 351 aaKnown RBP18.42■□□□□ 0.54
COL18A1-207ENST00000473212 GJC3Q8NFK1 279 aa18.42■□□□□ 0.54
COL18A1-207ENST00000473212 PP6455Q8WZ26 134 aa18.42■□□□□ 0.54
COL18A1-207ENST00000473212 TIMM10BQ9Y5J6 103 aa18.42■□□□□ 0.54
COL18A1-207ENST00000473212 A0A0U1RQV5 110 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 RRP8O43159 456 aaKnown RBP18.41■□□□□ 0.54
COL18A1-207ENST00000473212 NME2P1O60361 137 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 TSPAN15O95858 294 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 GLI4P10075 376 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 CCL3P10147 92 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 FOLR2P14207 255 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 ECI1P42126 302 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 CSNK1A1P48729 337 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 ARL6IP1Q15041 203 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 C15orf54Q8N8G6 183 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 FADS6Q8N9I5 356 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 LYPD6BQ8NI32 183 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 TOMM40LQ969M1 308 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 FAAP24Q9BTP7 215 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 GPR173Q9NS66 373 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 ANXA10Q9UJ72 324 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms