RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 ACP7Q6ZNF0 438 aa16.12■□□□□ 0.17
COL9A3-210ENST00000472880 SSX3Q99909 188 aa16.12■□□□□ 0.17
COL9A3-210ENST00000472880 FAM234AQ9H0X4 552 aa16.12■□□□□ 0.17
COL9A3-210ENST00000472880 MOB1AQ9H8S9 216 aa16.12■□□□□ 0.17
COL9A3-210ENST00000472880 C19orf12Q9NSK7 152 aa16.12■□□□□ 0.17
COL9A3-210ENST00000472880 VWFP04275 2813 aa16.12■□□□□ 0.17
COL9A3-210ENST00000472880 CMYA5Q8N3K9 4069 aa16.11■□□□□ 0.17
COL9A3-210ENST00000472880 RFPL4AA6NLU0 287 aa16.11■□□□□ 0.17
COL9A3-210ENST00000472880 LOC110117498-PIK3R3F6TDL0 507 aa16.11■□□□□ 0.17
COL9A3-210ENST00000472880 RFPL4AL1F8VTS6 287 aa16.11■□□□□ 0.17
COL9A3-210ENST00000472880 J3QT63 122 aa16.11■□□□□ 0.17
COL9A3-210ENST00000472880 HAAOP46952 286 aa16.11■□□□□ 0.17
COL9A3-210ENST00000472880 ESRRGP62508 458 aa16.11■□□□□ 0.17
COL9A3-210ENST00000472880 LRRC75BQ2VPJ9 315 aa16.11■□□□□ 0.17
COL9A3-210ENST00000472880 SLC35E4Q6ICL7 350 aa16.11■□□□□ 0.17
COL9A3-210ENST00000472880 HCP5Q6MZN7 132 aa16.11■□□□□ 0.17
COL9A3-210ENST00000472880 ZNF573Q86YE8 665 aa16.11■□□□□ 0.17
COL9A3-210ENST00000472880 ZNF561Q8N587 486 aa16.11■□□□□ 0.17
COL9A3-210ENST00000472880 UTP4Q969X6 686 aaKnown RBP16.11■□□□□ 0.17
COL9A3-210ENST00000472880 NRBF2Q96F24 287 aa16.11■□□□□ 0.17
COL9A3-210ENST00000472880 ZNF488Q96MN9 340 aa16.11■□□□□ 0.17
COL9A3-210ENST00000472880 POLDIP2Q9Y2S7 368 aa16.11■□□□□ 0.17
COL9A3-210ENST00000472880 PRKYO43930 277 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 TTRP02766 147 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 PGA5P0DJD9 388 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 RPL31P62899 125 aaKnown RBP16.1■□□□□ 0.17
COL9A3-210ENST00000472880 PTGES3Q15185 160 aaKnown RBP16.1■□□□□ 0.17
COL9A3-210ENST00000472880 LY6EQ16553 131 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 CLVS2Q5SYC1 327 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 BCL2L15Q5TBC7 163 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 ZNF322Q6U7Q0 402 aaPredicted RBP16.1■□□□□ 0.17
COL9A3-210ENST00000472880 ASRGL1Q7L266 308 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 MKXQ8IYA7 352 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 CD177Q8N6Q3 437 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 OR4C13Q8NGP0 309 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 OR5K1Q8NHB7 308 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 FAM110DQ8TAY7 271 aaPredicted RBP16.1■□□□□ 0.17
COL9A3-210ENST00000472880 C17orf50Q8WW18 174 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 PPP1R14AQ96A00 147 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 HEXA-AS1Q9H8Q6 139 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 GPR173Q9NS66 373 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 FBLN5Q9UBX5 448 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 WNK1Q9H4A3 2382 aa16.1■□□□□ 0.17
COL9A3-210ENST00000472880 hCG_1809904A0A1W2PP81 198 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 A0A1W2PPE2 198 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 A0A1W2PR64 198 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 A0A1W2PRV1 198 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 SYNGR1O43759 233 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 NXPH2O95156 264 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 CSF1P09603 554 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 CXCR4P61073 352 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 ACTR3P61158 418 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 FAHD1Q6P587 224 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 Q6ZTK2 550 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 SLC35F2Q8IXU6 374 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 RORBQ92753 470 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 MNTQ99583 582 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 RAB18Q9NP72 206 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 USE1Q9NZ43 259 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 H2AFY2Q9P0M6 372 aaPredicted RBP16.09■□□□□ 0.17
COL9A3-210ENST00000472880 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.09■□□□□ 0.17
COL9A3-210ENST00000472880 R4GMQ9 66 aa16.09■□□□□ 0.17
COL9A3-210ENST00000472880 TET2Q6N021 2002 aaPredicted RBP16.08■□□□□ 0.16
COL9A3-210ENST00000472880 DLGAP1O14490 977 aa16.08■□□□□ 0.16
COL9A3-210ENST00000472880 CIB2O75838 187 aa16.08■□□□□ 0.16
COL9A3-210ENST00000472880 PRDX2P32119 198 aa16.08■□□□□ 0.16
COL9A3-210ENST00000472880 CEBPDP49716 269 aaPredicted RBP16.08■□□□□ 0.16
COL9A3-210ENST00000472880 DAPP51397 102 aa16.08■□□□□ 0.16
COL9A3-210ENST00000472880 ATP6AP1Q15904 470 aa16.08■□□□□ 0.16
COL9A3-210ENST00000472880 CCDC121Q6ZUS5 278 aa16.08■□□□□ 0.16
COL9A3-210ENST00000472880 MEPCEQ7L2J0 689 aaKnown RBP16.08■□□□□ 0.16
COL9A3-210ENST00000472880 OR4M1Q8NGD0 313 aa16.08■□□□□ 0.16
COL9A3-210ENST00000472880 APOL4Q9BPW4 351 aa16.08■□□□□ 0.16
COL9A3-210ENST00000472880 MEGF9Q9H1U4 602 aa16.08■□□□□ 0.16
COL9A3-210ENST00000472880 OR14J1Q9UGF5 321 aa16.08■□□□□ 0.16
COL9A3-210ENST00000472880 OR52A1Q9UKL2 312 aa16.08■□□□□ 0.16
COL9A3-210ENST00000472880 AP4S1Q9Y587 144 aa16.08■□□□□ 0.16
COL9A3-210ENST00000472880 ZNF670-ZNF695F2Z2N8 137 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 M0R129 80 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 NOS1APO75052 506 aaPredicted RBP16.07■□□□□ 0.16
COL9A3-210ENST00000472880 SRSF10O75494 262 aaKnown RBP16.07■□□□□ 0.16
COL9A3-210ENST00000472880 COX7A1P24310 79 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 LGALS4P56470 323 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 HERPUD1Q15011 391 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 AANATQ16613 207 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 TMEM42Q69YG0 159 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 TMEM200BQ69YZ2 307 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 C11orf88Q6PI97 169 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 PLEKHG7Q6ZR37 379 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 BCDIN3DQ7Z5W3 292 aaKnown RBP16.07■□□□□ 0.16
COL9A3-210ENST00000472880 ELMOD2Q8IZ81 293 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 BATF2Q8N1L9 274 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 OR2T27Q8NH04 317 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 OR2T6Q8NHC8 308 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 NRIP2Q9BQI9 281 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 RANBP3Q9H6Z4 567 aaPredicted RBP16.07■□□□□ 0.16
COL9A3-210ENST00000472880 KRT84Q9NSB2 600 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 SIGLEC9Q9Y336 463 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 V9GYS6 101 aa16.07■□□□□ 0.16
COL9A3-210ENST00000472880 NOTCH1P46531 2555 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms