RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 Q6ZSR3 168 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 PNKDQ8N490 385 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 YIPF7Q8N8F6 280 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 OR4F5Q8NH21 305 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 TBC1D15Q8TC07 691 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 PYDC1Q8WXC3 89 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 DYRK2Q92630 601 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 TNFRSF14Q92956 283 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 SDSLQ96GA7 329 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 CENPNQ96H22 339 aaPredicted RBP7.4□□□□□ -1.22
USF1-204ENST00000472217 OSBPL10Q9BXB5 764 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 SLITRK2Q9H156 845 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 ZNF696Q9H7X3 374 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 RASL12Q9NYN1 266 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 FAM96BQ9Y3D0 163 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 MMP24Q9Y5R2 645 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 SNX5Q9Y5X3 404 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 A0A1B0GUS0 222 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 METTL15A6NJ78 407 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 DHRS7CA6NNS2 312 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 H3BSH0 61 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 M0R1W7 72 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 NPFFO15130 113 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 NDUFA7O95182 113 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 KNG1P01042 644 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 KRT8P05787 483 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 FBP1P09467 338 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 OR2T7P0C7T2 308 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 SAA4P35542 130 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 CEBPDP49716 269 aaPredicted RBP7.39□□□□□ -1.23
USF1-204ENST00000472217 CAPZA1P52907 286 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 RPL15P61313 204 aaKnown RBP7.39□□□□□ -1.23
USF1-204ENST00000472217 TAF9Q16594 264 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 C1orf122Q6ZSJ8 110 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 ASRGL1Q7L266 308 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 CATSPERDQ86XM0 798 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 ZNF573Q86YE8 665 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 FAM185AQ8N0U4 392 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 BATF2Q8N1L9 274 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 CD177Q8N6Q3 437 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 OR10H4Q8NGA5 316 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 OR8J1Q8NGP2 316 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 OR2T27Q8NH04 317 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 TRMT10AQ8TBZ6 339 aaKnown RBP7.39□□□□□ -1.23
USF1-204ENST00000472217 NPRL2Q8WTW4 380 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 WFDC12Q8WWY7 111 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 RORBQ92753 470 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 EME1Q96AY2 570 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 DPAGT1Q9H3H5 408 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 METTL8Q9H825 291 aaKnown RBP7.39□□□□□ -1.23
USF1-204ENST00000472217 PLEKHA1Q9HB21 404 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 BEX1Q9HBH7 125 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 C19orf12Q9NSK7 152 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 ZNRD1Q9P1U0 126 aa7.39□□□□□ -1.23
USF1-204ENST00000472217 CAB39Q9Y376 341 aaPredicted RBP7.39□□□□□ -1.23
USF1-204ENST00000472217 TRBV23-1A0A0A0MS06 115 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 MEIOCA2RUB1 952 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 ANKRD61A6NGH8 418 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 RFPL4AA6NLU0 287 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 RFPL4AL1F8VTS6 287 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 SLC1A7O00341 560 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 NOS1APO75052 506 aaPredicted RBP7.38□□□□□ -1.23
USF1-204ENST00000472217 NXPH2O95156 264 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 ALPLP05186 524 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 EEF1B2P24534 225 aaKnown RBP7.38□□□□□ -1.23
USF1-204ENST00000472217 MPZP25189 248 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 PRDX2P32119 198 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 ATP6V1E1P36543 226 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 KIR3DL2P43630 455 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 UBE2E1P51965 193 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 CDC42P60953 191 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 SRSF4Q08170 494 aaKnown RBP7.38□□□□□ -1.23
USF1-204ENST00000472217 BLMHQ13867 455 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 OLFML2AQ68BL7 652 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 NCR3LG1Q68D85 454 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 ANGPTL5Q86XS5 388 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 CALHM1Q8IU99 346 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 PRSS35Q8N3Z0 413 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 ZNF561Q8N587 486 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 RFKQ969G6 155 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 UBE2FQ969M7 185 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 RBM4BQ9BQ04 359 aaKnown RBP7.38□□□□□ -1.23
USF1-204ENST00000472217 NRIP2Q9BQI9 281 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 HES4Q9HCC6 221 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 POLDIP2Q9Y2S7 368 aa7.38□□□□□ -1.23
USF1-204ENST00000472217 IGKV1-27A0A075B6S5 117 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 LOC107986453A0A1B0GWG9 222 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 FAM230AA0A1W2PPH8 454 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 CLPSL1A2RUU4 121 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 BTBD17A6NE02 478 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 H0YAE9 185 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 H3BNX3 289 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 EI24O14681 340 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 SYT7O43581 403 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 SULT1C4O75897 302 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 PAHP00439 452 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 ISL1P61371 349 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 ERVK11-1P61568 191 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 ZNF85Q03923 595 aa7.37□□□□□ -1.23
USF1-204ENST00000472217 ACSM1Q08AH1 577 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms