RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 BBS7Q8IWZ6 715 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 LINC00304Q8N9R0 145 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 C1orf64Q8NEQ6 169 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 OR52K1Q8NGK4 314 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 OR51A7Q8NH64 312 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 PHF10Q8WUB8 498 aaKnown RBP1.92□□□□□ -2.1
PTCD3-209ENST00000472044 ORAOV1Q8WV07 137 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 MITD1Q8WV92 249 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 CIDECQ96AQ7 238 aaPredicted RBP1.92□□□□□ -2.1
PTCD3-209ENST00000472044 CENPNQ96H22 339 aaPredicted RBP1.92□□□□□ -2.1
PTCD3-209ENST00000472044 CHID1Q9BWS9 393 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 CHRNA10Q9GZZ6 450 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 RWDD2AQ9UIY3 292 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 RAB22AQ9UL26 194 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 RPRD2Q5VT52 1461 aaKnown RBP1.92□□□□□ -2.1
PTCD3-209ENST00000472044 MROH5Q6ZUA9 1318 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 ZSWIM8A7E2V4 1837 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 ADAMTSL3P82987 1691 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 NDUFS5O43920 106 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 ALOX12BO75342 701 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 OR4Q2P0C623 313 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 PSMB2P49721 201 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 MEF2CQ06413 473 aaPredicted RBP1.91□□□□□ -2.1
PTCD3-209ENST00000472044 STK38Q15208 465 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 TTC32Q5I0X7 151 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 TMEM69Q5SWH9 247 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 FAM27D1Q5T7N8 215 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 DUPD1Q68J44 220 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 THOC7Q6I9Y2 204 aaKnown RBP1.91□□□□□ -2.1
PTCD3-209ENST00000472044 TMEM136Q6ZRR5 245 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 SETD3Q86TU7 594 aaPredicted RBP1.91□□□□□ -2.1
PTCD3-209ENST00000472044 CALHM3Q86XJ0 350 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 ZNF680Q8NEM1 530 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 ING5Q8WYH8 240 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 HGDQ93099 445 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 FAM131CQ96AQ9 280 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 API5Q9BZZ5 524 aaKnown RBP1.91□□□□□ -2.1
PTCD3-209ENST00000472044 STX18Q9P2W9 335 aaKnown RBP1.91□□□□□ -2.1
PTCD3-209ENST00000472044 FLVCR2Q9UPI3 526 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 ENPP4Q9Y6X5 453 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 PRR14LQ5THK1 2151 aa1.91□□□□□ -2.1
PTCD3-209ENST00000472044 AK9Q5TCS8 1911 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 PLXNB3Q9ULL4 1909 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 OR6C70A6NIJ9 312 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 CNMDO75829 334 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 PFN1P07737 140 aaKnown RBP1.9□□□□□ -2.11
PTCD3-209ENST00000472044 HLA-GP17693 338 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 HLA-DMAP28067 261 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 P2RY2P41231 377 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 KRTAP10-1P60331 282 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 ATP5G2Q06055 141 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 HNRNPA1L2Q32P51 320 aaKnown RBP1.9□□□□□ -2.11
PTCD3-209ENST00000472044 CAVIN4Q5BKX8 364 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 DAZ4Q86SG3 579 aaKnown RBP1.9□□□□□ -2.11
PTCD3-209ENST00000472044 CA13Q8N1Q1 262 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 OR13C9Q8NGT0 318 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 FAM57AQ8TBR7 257 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 SPACA5Q96QH8 159 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 C20orf144Q9BQM9 153 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 TMED9Q9BVK6 235 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 SND1-IT1Q9HBX3 110 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 DAZ1Q9NQZ3 744 aaKnown RBP1.9□□□□□ -2.11
PTCD3-209ENST00000472044 PRO0628Q9UI54 55 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 ELP1O95163 1332 aa1.9□□□□□ -2.11
PTCD3-209ENST00000472044 FAM240AA0A1B0GVK7 77 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 CLDN34H7C241 214 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 M0R1B8 84 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 ZNF593O00488 134 aaPredicted RBP1.89□□□□□ -2.11
PTCD3-209ENST00000472044 RHOCP08134 193 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 SNRPAP09012 282 aaKnown RBP1.89□□□□□ -2.11
PTCD3-209ENST00000472044 INAFM2P0DMQ5 153 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 RGS6P49758 472 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 OR12D2P58182 307 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 IFFO1Q0D2I5 559 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 LAMTOR4Q0VGL1 99 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 ZNF235Q14590 738 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 MRPL2Q5T653 305 aaKnown RBP1.89□□□□□ -2.11
PTCD3-209ENST00000472044 SYT6Q5T7P8 510 aaPredicted RBP1.89□□□□□ -2.11
PTCD3-209ENST00000472044 PDPNQ86YL7 162 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 SGPP2Q8IWX5 399 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 FAM58AQ8N1B3 248 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 OR4A15Q8NGL6 344 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 ZNF420Q8TAQ5 688 aaPredicted RBP1.89□□□□□ -2.11
PTCD3-209ENST00000472044 NT5CQ8TCD5 201 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 ZBED3Q96IU2 234 aaPredicted RBP1.89□□□□□ -2.11
PTCD3-209ENST00000472044 RNF170Q96K19 258 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 RILPQ96NA2 401 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 NAP1L5Q96NT1 182 aaPredicted RBP1.89□□□□□ -2.11
PTCD3-209ENST00000472044 SEC22CQ9BRL7 303 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 MAP1LC3CQ9BXW4 147 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 ANGPTL4Q9BY76 406 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 TM6SF2Q9BZW4 377 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 COA1Q9GZY4 146 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 WDR55Q9H6Y2 383 aaPredicted RBP1.89□□□□□ -2.11
PTCD3-209ENST00000472044 RDH14Q9HBH5 336 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 AP3M1Q9Y2T2 418 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 ACOT9Q9Y305 439 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 ORC6Q9Y5N6 252 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 VWA8A3KMH1 1905 aa1.89□□□□□ -2.11
PTCD3-209ENST00000472044 NID2Q14112 1375 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms