RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 OR4M2Q8NGB6 313 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 OR5D14Q8NGL3 314 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 TRMT10AQ8TBZ6 339 aaKnown RBP12.75□□□□□ -0.37
SDC3-203ENST00000471567 GPR148Q8TDV2 347 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 SPSB1Q96BD6 273 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 SMIM19Q96E16 107 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 BORCS8Q96FH0 119 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 DNTTIP1Q9H147 329 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 DUSP21Q9H596 190 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 NEK6Q9HC98 313 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 DNAJB11Q9UBS4 358 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 CLN8Q9UBY8 286 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 DHDHQ9UQ10 334 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 SIRT4Q9Y6E7 314 aaPredicted RBP12.75□□□□□ -0.37
SDC3-203ENST00000471567 IGHV3OR15-7A0A075B7D8 119 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 IGKV1-9A0A0C4DH69 117 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 LALBAP00709 142 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 MT-ND2P03891 347 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 RBP2P50120 134 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 ATP1B3P54709 279 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 IL24Q13007 206 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 C11orf91Q3C1V1 193 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 DCAF12L2Q5VW00 463 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 WDR25Q64LD2 544 aaPredicted RBP12.74□□□□□ -0.37
SDC3-203ENST00000471567 SERPINA12Q8IW75 414 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 TEX29Q8N6K0 151 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 TSEN15Q8WW01 171 aaKnown RBP12.74□□□□□ -0.37
SDC3-203ENST00000471567 TMIGD2Q96BF3 282 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 CNBD2Q96M20 576 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 ZNF184Q99676 751 aaPredicted RBP12.74□□□□□ -0.37
SDC3-203ENST00000471567 WDR13Q9H1Z4 485 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 Q9H521 79 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 ZCCHC4Q9H5U6 513 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 OR5V1Q9UGF6 321 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 ZNF281Q9Y2X9 895 aa12.74□□□□□ -0.37
SDC3-203ENST00000471567 PHF1O43189 567 aaPredicted RBP12.73□□□□□ -0.37
SDC3-203ENST00000471567 SYNGR1O43759 233 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 CD1AP06126 327 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 CD2P06729 351 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 PGA5P0DJD9 388 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 CRHBPP24387 322 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 AZGP1P25311 298 aaKnown RBP12.73□□□□□ -0.37
SDC3-203ENST00000471567 BDH1Q02338 343 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 ACSM1Q08AH1 577 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 RBM48Q5RL73 367 aaKnown RBP12.73□□□□□ -0.37
SDC3-203ENST00000471567 STUMQ69YW2 141 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 FAHD2BQ6P2I3 314 aaPredicted RBP12.73□□□□□ -0.37
SDC3-203ENST00000471567 LHFPL2Q6ZUX7 228 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 SLC36A1Q7Z2H8 476 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 ANGPTL5Q86XS5 388 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 CALHM1Q8IU99 346 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 NPRL2Q8WTW4 380 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 RGP1Q92546 391 aaPredicted RBP12.73□□□□□ -0.37
SDC3-203ENST00000471567 GHSRQ92847 366 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 SEH1LQ96EE3 360 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 FAHD2AQ96GK7 314 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 NRIP2Q9BQI9 281 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 MND1Q9BWT6 205 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 PAK1IP1Q9NWT1 392 aaPredicted RBP12.73□□□□□ -0.37
SDC3-203ENST00000471567 NLKQ9UBE8 527 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 CTSZQ9UBR2 303 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 NF1P21359 2839 aa12.73□□□□□ -0.37
SDC3-203ENST00000471567 IGKV1-27A0A075B6S5 117 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 TRAPPC2LH3BP13 241 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 TMPRSS2O15393 492 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 DENRO43583 198 aaKnown RBP12.72□□□□□ -0.37
SDC3-203ENST00000471567 OCM2P0CE71 109 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 OCMP0CE72 109 aaPredicted RBP12.72□□□□□ -0.37
SDC3-203ENST00000471567 FAM157CP0CG43 387 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 MTCP1P56278 107 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 GMFBP60983 142 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 PAX2Q02962 417 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 IRF3Q14653 427 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 SMIM21Q3B7S5 101 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 YIF1BQ5BJH7 314 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 CD276Q5ZPR3 534 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 ACP7Q6ZNF0 438 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 OR13C9Q8NGT0 318 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 ANGPTL6Q8NI99 470 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 RAB40AQ8WXH6 277 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 POM121Q96HA1 1249 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 MED30Q96HR3 178 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 PGLYRP3Q96LB9 341 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 OPALINQ96PE5 141 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 CCL13Q99616 98 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 TMPRSS13Q9BYE2 586 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 RASSF4Q9H2L5 321 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 MMP26Q9NRE1 261 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 BLOC1S6Q9UL45 172 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 INSIG2Q9Y5U4 225 aa12.72□□□□□ -0.37
SDC3-203ENST00000471567 DOCK11Q5JSL3 2073 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 WNK2Q9Y3S1 2297 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 LOC105371242A0A075B767 164 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 NKX6-3A6NJ46 265 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 OR2AT4A6NND4 320 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 DVL1O14640 695 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 GPR37O15354 613 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 RGS10O43665 173 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 SULT1B1O43704 296 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 AMY2BP19961 511 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms