RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 IGSF11Q5DX21 431 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 LIPNQ5VXI9 398 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 NUFIP2Q7Z417 695 aaKnown RBP6.2□□□□□ -1.42
BRCA1-210ENST00000471181 FAM24BQ8N5W8 94 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 BCORP1Q8N888 145 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 TMPRSS13Q9BYE2 586 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 GLIPR2Q9H4G4 154 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 RNF167Q9H6Y7 350 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 TXNRD2Q9NNW7 524 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 OCIAD1Q9NX40 245 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 TBL2Q9Y4P3 447 aaKnown RBP6.2□□□□□ -1.42
BRCA1-210ENST00000471181 IGSF23A1L1A6 192 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 TLCD2A6NGC4 264 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 TIMP1P01033 207 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 PAFAH1B2P68402 229 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 AESQ08117 197 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 SP6Q3SY56 376 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 PIANPQ8IYJ0 282 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 OR4P4Q8NGL7 312 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 OR10G4Q8NGN3 311 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 OR10G9Q8NGN4 311 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 OR10G7Q8NGN6 311 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 SGMS2Q8NHU3 365 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 TM4SF18Q96CE8 201 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 JAM3Q9BX67 310 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 IL17CQ9P0M4 197 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 EXOGQ9Y2C4 368 aaKnown RBP6.2□□□□□ -1.42
BRCA1-210ENST00000471181 RAXQ9Y2V3 346 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 A0A087X0M5 115 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 A0A1B0GX30 115 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 EIF4E2O60573 245 aaKnown RBP6.2□□□□□ -1.42
BRCA1-210ENST00000471181 APCSP02743 223 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 CD99P14209 185 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 LGALS3P17931 250 aaKnown RBP6.2□□□□□ -1.42
BRCA1-210ENST00000471181 CST5P28325 142 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-210ENST00000471181 HES3Q5TGS1 186 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 WDR25Q64LD2 544 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-210ENST00000471181 TMEM207Q6UWW9 146 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 TAS1R1Q7RTX1 841 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 TMEM183AQ8IXX5 376 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 PPP1R1CQ8WVI7 109 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 HAPLN2Q9GZV7 340 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 FBXL17Q9UF56 701 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 A0A0B4J293 547 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 MKRN2OSH3BPM6 223 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 AKR7A2O43488 359 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 GNG7O60262 68 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 ICOSLGO75144 302 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 CRYABP02511 175 aaKnown RBP6.2□□□□□ -1.42
BRCA1-210ENST00000471181 IGHV4-34P06331 123 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 HIST1H1CP16403 213 aaKnown RBP6.2□□□□□ -1.42
BRCA1-210ENST00000471181 GABRB1P18505 474 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 CDAP32320 146 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 HOXD13P35453 343 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 KIR2DS2P43631 304 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 ZNF121P58317 390 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-210ENST00000471181 NAAAQ02083 359 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 NCMAPQ5T1S8 102 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 ABLIM2Q6H8Q1 611 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 ADTRPQ96IZ2 230 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 ZIC5Q96T25 663 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 WDR13Q9H1Z4 485 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 AUNIPQ9H7T9 357 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 PIPOXQ9P0Z9 390 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 DNAJC25-GNG10A0A024R161 153 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 TMEM262E9PQX1 116 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 CLDN34H7C241 214 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 SNAI1O95863 264 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-210ENST00000471181 EPXP11678 715 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 FABP2P12104 132 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 COL8A1P27658 744 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 KLF3P57682 345 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-210ENST00000471181 JOSD1Q15040 202 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-210ENST00000471181 CMPK2Q5EBM0 449 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 SLC25A30Q5SVS4 291 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 PHYHIPQ92561 330 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 STARD4Q96DR4 205 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 SLC25A33Q9BSK2 321 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 FAM53CQ9NYF3 392 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 FKBP11Q9NYL4 201 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 PLEKHB1Q9UF11 243 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-210ENST00000471181 R4GMQ9 66 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 SCN11AQ9UI33 1791 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 TRBV23-1A0A0A0MS06 115 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 DUXBA0A1W2PPF3 345 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 IGHA1P01876 353 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 IGHA2P01877 340 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 HKR1P10072 659 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 HLA-GP17693 338 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 ATF1P18846 271 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 SLC6A1P30531 599 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 CDX1P47902 265 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-210ENST00000471181 MRPS21P82921 87 aaKnown RBP6.19□□□□□ -1.42
BRCA1-210ENST00000471181 RELQ04864 619 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-210ENST00000471181 ZNF273Q14593 569 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 SLC25A46Q96AG3 418 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 SNRNP40Q96DI7 357 aaKnown RBP6.19□□□□□ -1.42
BRCA1-210ENST00000471181 OXGR1Q96P68 337 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 SORT1Q99523 831 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 SPOCK3Q9BQ16 436 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms