RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 NRASP01111 189 aa14.25□□□□□ -0.13
COL7A1-208ENST00000470076 GABRA5P31644 462 aa14.25□□□□□ -0.13
COL7A1-208ENST00000470076 AANATQ16613 207 aa14.25□□□□□ -0.13
COL7A1-208ENST00000470076 DNAL1Q4LDG9 190 aa14.25□□□□□ -0.13
COL7A1-208ENST00000470076 C11orf88Q6PI97 169 aa14.25□□□□□ -0.13
COL7A1-208ENST00000470076 ZNF561Q8N587 486 aa14.25□□□□□ -0.13
COL7A1-208ENST00000470076 MEGF9Q9H1U4 602 aa14.25□□□□□ -0.13
COL7A1-208ENST00000470076 HEXA-AS1Q9H8Q6 139 aa14.25□□□□□ -0.13
COL7A1-208ENST00000470076 C19orf12Q9NSK7 152 aa14.25□□□□□ -0.13
COL7A1-208ENST00000470076 COPS3Q9UNS2 423 aa14.25□□□□□ -0.13
COL7A1-208ENST00000470076 hCG_1809904A0A1W2PP81 198 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 A0A1W2PPE2 198 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 A0A1W2PR64 198 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 A0A1W2PRV1 198 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 LOC110117498-PIK3R3F6TDL0 507 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 J3QT63 122 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 GYG2O15488 501 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 NOS1APO75052 506 aaPredicted RBP14.24□□□□□ -0.13
COL7A1-208ENST00000470076 TTRP02766 147 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 PGA5P0DJD9 388 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 PRDX2P32119 198 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 HAAOP46952 286 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 ACTR3P61158 418 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 RPL31P62899 125 aaKnown RBP14.24□□□□□ -0.13
COL7A1-208ENST00000470076 MFGE8Q08431 387 aaPredicted RBP14.24□□□□□ -0.13
COL7A1-208ENST00000470076 PTGES3Q15185 160 aaKnown RBP14.24□□□□□ -0.13
COL7A1-208ENST00000470076 LRRC75BQ2VPJ9 315 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 CLVS2Q5SYC1 327 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 FAHD1Q6P587 224 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 ZNF322Q6U7Q0 402 aaPredicted RBP14.24□□□□□ -0.13
COL7A1-208ENST00000470076 CD177Q8N6Q3 437 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 C17orf50Q8WW18 174 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 PPP1R14AQ96A00 147 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 AJUBAQ96IF1 538 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 MNTQ99583 582 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 TTTY10Q9BZA0 68 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 RAB18Q9NP72 206 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 POLDIP2Q9Y2S7 368 aa14.24□□□□□ -0.13
COL7A1-208ENST00000470076 DLGAP1O14490 977 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 SYNGR1O43759 233 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 PRKYO43930 277 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 SRSF10O75494 262 aaKnown RBP14.23□□□□□ -0.13
COL7A1-208ENST00000470076 CSF1P09603 554 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 KIR2DS4P43632 304 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 CXCR4P61073 352 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 ESRRGP62508 458 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 BCL2L15Q5TBC7 163 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 TMEM42Q69YG0 159 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 TMEM200BQ69YZ2 307 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 Q6ZTK2 550 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 MEPCEQ7L2J0 689 aaKnown RBP14.23□□□□□ -0.13
COL7A1-208ENST00000470076 MKXQ8IYA7 352 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 OR4C13Q8NGP0 309 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 FAM110DQ8TAY7 271 aaPredicted RBP14.23□□□□□ -0.13
COL7A1-208ENST00000470076 ZNF488Q96MN9 340 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 RANBP3Q9H6Z4 567 aaPredicted RBP14.23□□□□□ -0.13
COL7A1-208ENST00000470076 USE1Q9NZ43 259 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 H2AFY2Q9P0M6 372 aaPredicted RBP14.23□□□□□ -0.13
COL7A1-208ENST00000470076 GTF2A1LQ9UNN4 478 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 POMPQ9Y244 141 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 V9GYS6 101 aa14.23□□□□□ -0.13
COL7A1-208ENST00000470076 A0A0G2JK05 382 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 PQLC2LA1A4F0 135 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 DHRS7CA6NNS2 312 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 NXPH2O95156 264 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 DAPP51397 102 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 EFNB2P52799 333 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 HERPUD1Q15011 391 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 LY6EQ16553 131 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 SLC35F2Q8IXU6 374 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 ELMOD2Q8IZ81 293 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 C11orf42Q8N5U0 333 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 DTX3Q8N9I9 347 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 PPP1R35Q8TAP8 253 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 RORBQ92753 470 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 APOL4Q9BPW4 351 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 NRIP2Q9BQI9 281 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 GPR173Q9NS66 373 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 OR52A1Q9UKL2 312 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.22□□□□□ -0.13
COL7A1-208ENST00000470076 R4GMQ9 66 aa14.22□□□□□ -0.13
COL7A1-208ENST00000470076 MPZP25189 248 aa14.21□□□□□ -0.13
COL7A1-208ENST00000470076 LGALS4P56470 323 aa14.21□□□□□ -0.13
COL7A1-208ENST00000470076 NXNL2Q5VZ03 156 aa14.21□□□□□ -0.13
COL7A1-208ENST00000470076 CRIP3Q6Q6R5 217 aa14.21□□□□□ -0.13
COL7A1-208ENST00000470076 LIAT1Q6ZQX7 453 aa14.21□□□□□ -0.13
COL7A1-208ENST00000470076 ASRGL1Q7L266 308 aa14.21□□□□□ -0.13
COL7A1-208ENST00000470076 CALHM1Q8IU99 346 aa14.21□□□□□ -0.13
COL7A1-208ENST00000470076 OR14K1Q8NGZ2 314 aa14.21□□□□□ -0.13
COL7A1-208ENST00000470076 OR2T27Q8NH04 317 aa14.21□□□□□ -0.13
COL7A1-208ENST00000470076 OR2T6Q8NHC8 308 aa14.21□□□□□ -0.13
COL7A1-208ENST00000470076 UTP4Q969X6 686 aaKnown RBP14.21□□□□□ -0.13
COL7A1-208ENST00000470076 ADGRL4Q9HBW9 690 aa14.21□□□□□ -0.13
COL7A1-208ENST00000470076 HES4Q9HCC6 221 aa14.21□□□□□ -0.13
COL7A1-208ENST00000470076 CLN6Q9NWW5 311 aa14.21□□□□□ -0.13
COL7A1-208ENST00000470076 SNX5Q9Y5X3 404 aa14.21□□□□□ -0.13
COL7A1-208ENST00000470076 A0A1B0GTI1 187 aa14.2□□□□□ -0.14
COL7A1-208ENST00000470076 ZNF670-ZNF695F2Z2N8 137 aa14.2□□□□□ -0.14
COL7A1-208ENST00000470076 TK1P04183 234 aa14.2□□□□□ -0.14
COL7A1-208ENST00000470076 CEBPDP49716 269 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms