RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 LHFPL2Q6ZUX7 228 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 ZNF367Q7RTV3 350 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 CALHM1Q8IU99 346 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 MS4A15Q8N5U1 240 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 LINC01356Q8N9X3 169 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 MSI2Q96DH6 328 aaKnown RBP10□□□□□ -0.81
VPS13D-204ENST00000469054 WDR13Q9H1Z4 485 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 TAS2R4Q9NYW5 299 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 MIOXQ9UGB7 285 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 DYSFO75923 2080 aa10□□□□□ -0.81
VPS13D-204ENST00000469054 IGHV3OR15-7A0A075B7D8 119 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 A0A1W2PPK0 400 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 B4DSR2 109 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 ZNF879B4DU55 563 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 FAM157AC9JC47 383 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 F5H0A9 414 aaPredicted RBP9.99□□□□□ -0.81
VPS13D-204ENST00000469054 TNFRSF13BO14836 293 aaPredicted RBP9.99□□□□□ -0.81
VPS13D-204ENST00000469054 NDUFA2O43678 99 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 NOS1APO75052 506 aaPredicted RBP9.99□□□□□ -0.81
VPS13D-204ENST00000469054 ACAA1P09110 424 aaPredicted RBP9.99□□□□□ -0.81
VPS13D-204ENST00000469054 WNT2P09544 360 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 PGA5P0DJD9 388 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 CPEP16870 476 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 RAB3AP20336 220 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 PCMT1P22061 227 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 GMFBP60983 142 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 IL24Q13007 206 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 LIPKQ5VXJ0 399 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 ZNF773Q6PK81 442 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 FAM90A1Q86YD7 464 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 LURAP1LQ8IV03 231 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 POC1AQ8NBT0 407 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 OR51A2Q8NGJ7 313 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 THRSPQ92748 146 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 C12orf43Q96C57 262 aaKnown RBP9.99□□□□□ -0.81
VPS13D-204ENST00000469054 SEH1LQ96EE3 360 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 OR14A2Q96R54 314 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 TMED9Q9BVK6 235 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 RASL12Q9NYN1 266 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 LRCH1Q9Y2L9 728 aa9.99□□□□□ -0.81
VPS13D-204ENST00000469054 ACANP16112 2415 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 HIVEP1P15822 2718 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 TRBV5-7A0A0A0MS05 114 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 PIN1P1O15428 100 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 MAGEB3O15480 346 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 GPX5O75715 221 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 PLATP00750 562 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 TGFAP01135 160 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 GYPAP02724 150 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 HCKP08631 526 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 RPS2P15880 293 aaKnown RBP9.98□□□□□ -0.81
VPS13D-204ENST00000469054 ZNF16P17020 682 aaPredicted RBP9.98□□□□□ -0.81
VPS13D-204ENST00000469054 IGFBP3P17936 291 aaPredicted RBP9.98□□□□□ -0.81
VPS13D-204ENST00000469054 MAPK3P27361 379 aaPredicted RBP9.98□□□□□ -0.81
VPS13D-204ENST00000469054 TGFBR2P37173 567 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 PPP3R1P63098 170 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 PDZK1IP1Q13113 114 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 ACSM3Q53FZ2 586 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 ARMCX4Q5H9R4 360 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 LYPD2Q6UXB3 125 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 UNQ9370/PRO34162Q6UXP9 181 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 SLC25A26Q70HW3 274 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 NLRC3Q7RTR2 1065 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 PHC2Q8IXK0 858 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 TMIGD2Q96BF3 282 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 ORAI1Q96D31 301 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 NEIL1Q96FI4 390 aaPredicted RBP9.98□□□□□ -0.81
VPS13D-204ENST00000469054 ZNF488Q96MN9 340 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 DERL3Q96Q80 235 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 SPACA5Q96QH8 159 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 NRIP2Q9BQI9 281 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 TMEM138Q9NPI0 162 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 SNTG1Q9NSN8 517 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 NLKQ9UBE8 527 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 CKLFQ9UBR5 152 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 DNAJB11Q9UBS4 358 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 FOXJ3Q9UPW0 622 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 CSPG4Q6UVK1 2322 aa9.98□□□□□ -0.81
VPS13D-204ENST00000469054 MED13LQ71F56 2210 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 ADAM20O43506 726 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 FOXH1O75593 365 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 SC5DO75845 299 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 CYB5AP00167 134 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 ALDOBP05062 364 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 MSMBP08118 114 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 FSTP19883 344 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 BDKRB2P30411 391 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 POU3F4P49335 361 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 ERVK11-1P61568 191 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 SEC61A1P61619 476 aaKnown RBP9.97□□□□□ -0.81
VPS13D-204ENST00000469054 INSL4Q14641 139 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 TRAM1Q15629 374 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 KISS1Q15726 138 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 ESCO2Q56NI9 601 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 ATPAF1Q5TC12 328 aaPredicted RBP9.97□□□□□ -0.81
VPS13D-204ENST00000469054 UBE2UQ5VVX9 321 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 FAM166AQ6J272 317 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 CRIP3Q6Q6R5 217 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 ACP7Q6ZNF0 438 aa9.97□□□□□ -0.81
VPS13D-204ENST00000469054 Q71RC1 249 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms