RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 SPSB1Q96BD6 273 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 FAHD2AQ96GK7 314 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 PDCD1LG2Q9BQ51 273 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 DUSP21Q9H596 190 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 CLN8Q9UBY8 286 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 PTGES3LE9PB15 166 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 SLC1A7O00341 560 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 AKR7A2O43488 359 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 ADAM20O43506 726 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 RHBDL1O75783 438 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 GYPAP02724 150 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 CD1AP06126 327 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 FAM157CP0CG43 387 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 PGA5P0DJD9 388 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 RBP2P50120 134 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 ATP1B3P54709 279 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 TAS2R43P59537 309 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 SEC61A1P61619 476 aaKnown RBP16.68■□□□□ 0.26
NPHP4-206ENST00000468253 HOXA4Q00056 320 aaPredicted RBP16.68■□□□□ 0.26
NPHP4-206ENST00000468253 PAX2Q02962 417 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 CD276Q5ZPR3 534 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 DMKNQ6E0U4 476 aaPredicted RBP16.68■□□□□ 0.26
NPHP4-206ENST00000468253 SLC36A1Q7Z2H8 476 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 POC1AQ8NBT0 407 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 GPR148Q8TDV2 347 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 ZCCHC4Q9H5U6 513 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 OR5V1Q9UGF6 321 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 ZNF281Q9Y2X9 895 aa16.68■□□□□ 0.26
NPHP4-206ENST00000468253 SVEP1Q4LDE5 3571 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 IGKV1-9A0A0C4DH69 117 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 KIR2DS1A0A191URI9 304 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 FAM230AA0A1W2PPH8 454 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 GPR37O15354 613 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 PHF1O43189 567 aaPredicted RBP16.67■□□□□ 0.26
NPHP4-206ENST00000468253 GLRA1P23415 457 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 WNT4P56705 351 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 SLC35A2P78381 396 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 STUMQ69YW2 141 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 ANGPTL6Q8NI99 470 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 RAB40AQ8WXH6 277 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 TMIGD2Q96BF3 282 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 SMIM19Q96E16 107 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 BORCS8Q96FH0 119 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 MED30Q96HR3 178 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 DMRTB1Q96MA1 342 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 TMPRSS13Q9BYE2 586 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 WDR13Q9H1Z4 485 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 MMP26Q9NRE1 261 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 DNAJB11Q9UBS4 358 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 DHDHQ9UQ10 334 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 INSIG2Q9Y5U4 225 aa16.67■□□□□ 0.26
NPHP4-206ENST00000468253 SIRT4Q9Y6E7 314 aaPredicted RBP16.67■□□□□ 0.26
NPHP4-206ENST00000468253 IGHV3OR15-7A0A075B7D8 119 aa16.66■□□□□ 0.26
NPHP4-206ENST00000468253 ECDO95905 644 aaPredicted RBP16.66■□□□□ 0.26
NPHP4-206ENST00000468253 LALBAP00709 142 aa16.66■□□□□ 0.26
NPHP4-206ENST00000468253 LIPFP07098 398 aa16.66■□□□□ 0.26
NPHP4-206ENST00000468253 ERVK11-1P61568 191 aa16.66■□□□□ 0.26
NPHP4-206ENST00000468253 BDH1Q02338 343 aa16.66■□□□□ 0.26
NPHP4-206ENST00000468253 PAX8Q06710 450 aa16.66■□□□□ 0.26
NPHP4-206ENST00000468253 ACSM1Q08AH1 577 aa16.66■□□□□ 0.26
NPHP4-206ENST00000468253 XAF1Q6GPH4 301 aa16.66■□□□□ 0.26
NPHP4-206ENST00000468253 LHFPL2Q6ZUX7 228 aa16.66■□□□□ 0.26
NPHP4-206ENST00000468253 ANGPTL5Q86XS5 388 aa16.66■□□□□ 0.26
NPHP4-206ENST00000468253 CALHM1Q8IU99 346 aa16.66■□□□□ 0.26
NPHP4-206ENST00000468253 GHSRQ92847 366 aa16.66■□□□□ 0.26
NPHP4-206ENST00000468253 DACT3Q96B18 629 aaPredicted RBP16.66■□□□□ 0.26
NPHP4-206ENST00000468253 NRIP2Q9BQI9 281 aa16.66■□□□□ 0.26
NPHP4-206ENST00000468253 C7orf69Q9H7B7 122 aa16.66■□□□□ 0.26
NPHP4-206ENST00000468253 NLKQ9UBE8 527 aa16.66■□□□□ 0.26
NPHP4-206ENST00000468253 WNK2Q9Y3S1 2297 aa16.66■□□□□ 0.26
NPHP4-206ENST00000468253 IGKV1-27A0A075B6S5 117 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 LOC105371242A0A075B767 164 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 OR2AT4A6NND4 320 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 MYL12BO14950 172 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 TMPRSS2O15393 492 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 SYNGR1O43759 233 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 CD2P06729 351 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 SRD5A1P18405 259 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 AMY2BP19961 511 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 MTCP1P56278 107 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 KRTAP21-3Q3LHN1 58 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 RBM48Q5RL73 367 aaKnown RBP16.65■□□□□ 0.26
NPHP4-206ENST00000468253 ZNF529Q6P280 563 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 ZNF788Q6ZQV5 615 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 MKXQ8IYA7 352 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 TRMT10AQ8TBZ6 339 aaKnown RBP16.65■□□□□ 0.26
NPHP4-206ENST00000468253 SEH1LQ96EE3 360 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 CCL13Q99616 98 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 ZNF184Q99676 751 aaPredicted RBP16.65■□□□□ 0.26
NPHP4-206ENST00000468253 SEBOXQ9HB31 216 aaPredicted RBP16.65■□□□□ 0.26
NPHP4-206ENST00000468253 HES4Q9HCC6 221 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 CTSZQ9UBR2 303 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 MXRA5Q9NR99 2828 aa16.65■□□□□ 0.26
NPHP4-206ENST00000468253 DENRO43583 198 aaKnown RBP16.64■□□□□ 0.25
NPHP4-206ENST00000468253 IFNA2P01563 188 aa16.64■□□□□ 0.25
NPHP4-206ENST00000468253 PPIAL4GP0DN37 164 aa16.64■□□□□ 0.25
NPHP4-206ENST00000468253 PSG2P11465 335 aa16.64■□□□□ 0.25
NPHP4-206ENST00000468253 CRHBPP24387 322 aa16.64■□□□□ 0.25
NPHP4-206ENST00000468253 AZGP1P25311 298 aaKnown RBP16.64■□□□□ 0.25
NPHP4-206ENST00000468253 IRF3Q14653 427 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms