RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SNTB1Q13884 538 aaKnown RBP12.17□□□□□ -0.46
BRAT1-203ENST00000467558 LAIR2Q6ISS4 152 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 NLRC3Q7RTR2 1065 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 C6orf201Q7Z4U5 140 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 SLC38A6Q8IZM9 456 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 S1PR3Q99500 378 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 FAAP24Q9BTP7 215 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 SCN2AQ99250 2005 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 DCTN6O00399 190 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 TMIGD3P0DMS9 266 aaPredicted RBP12.17□□□□□ -0.46
BRAT1-203ENST00000467558 BAXQ07812 192 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 SLC35G3Q8N808 338 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 DNAJC13O75165 2243 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 C1orf196B1AJZ1 125 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 RPL12P30050 165 aaKnown RBP12.17□□□□□ -0.46
BRAT1-203ENST00000467558 LGALS4P56470 323 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 AKR1C1Q04828 323 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 TSC22D1Q15714 1073 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 INPP5JQ15735 1006 aaPredicted RBP12.17□□□□□ -0.46
BRAT1-203ENST00000467558 RBMS3Q6XE24 437 aaKnown RBP12.17□□□□□ -0.46
BRAT1-203ENST00000467558 C17orf107Q6ZR85 190 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 MOB1BQ7L9L4 216 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 CDH26Q8IXH8 852 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 TRMT61AQ96FX7 289 aaKnown RBP12.17□□□□□ -0.46
BRAT1-203ENST00000467558 OR2H1Q9GZK4 316 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 TMEM30CPA0ZSE6 113 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 GPR31O00270 319 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 TIAF1O95411 115 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 FTH1P19P0C7X4 201 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 PPP1CBP62140 327 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 C3AR1Q16581 482 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 FAM27BQ5VT28 67 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 S100A7AQ86SG5 101 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 OR2Z1Q8NG97 314 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 MARC2Q969Z3 335 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 TTTY12Q9BZ98 90 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 NXF2Q9GZY0 626 aaKnown RBP12.17□□□□□ -0.46
BRAT1-203ENST00000467558 KCNIP2Q9NS61 270 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 LAMP3Q9UQV4 416 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 KLHDC2Q9Y2U9 406 aa12.17□□□□□ -0.46
BRAT1-203ENST00000467558 ARHGEF17Q96PE2 2063 aaPredicted RBP12.16□□□□□ -0.46
BRAT1-203ENST00000467558 NXPH3O95157 252 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 PDGFAP04085 211 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 ST3GAL2Q16842 350 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 BRICD5Q6PL45 260 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 ZNF680Q8NEM1 530 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 ROM1Q03395 351 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 DHRS2Q13268 280 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 HNF4GQ14541 408 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 PCOLCEQ15113 449 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 PDCD1Q15116 288 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 FN3KRPQ9HA64 309 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 IGKV3D-11A0A0A0MRZ8 115 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 HPNP05981 417 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 ZNF883P0CG24 379 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 PLA1AQ53H76 456 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 OR8G2PQ6IF36 304 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 C20orf196Q8IYI0 205 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 OR5AP2Q8NGF4 316 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 RBPMSQ93062 196 aaKnown RBP12.16□□□□□ -0.46
BRAT1-203ENST00000467558 PIGMQ9H3S5 423 aa12.16□□□□□ -0.46
BRAT1-203ENST00000467558 IGKV1D-42A0A075B6H8 117 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 SHOXO15266 292 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 SPRY3O43610 288 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 IL11P20809 199 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 KCNK17Q96T54 332 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 ZNF230Q9UIE0 474 aaPredicted RBP12.15□□□□□ -0.46
BRAT1-203ENST00000467558 NPIPB9F8W1W9 429 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 AKR7A2O43488 359 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 SSX4O60224 188 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 COX6A1P12074 109 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 CHRNB4P30926 498 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 ZNF79Q15937 498 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 CD200R1LQ6Q8B3 271 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 LRRTM1Q86UE6 522 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 KCNRGQ8N5I3 272 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 NUPL2O15504 423 aaKnown RBP12.15□□□□□ -0.46
BRAT1-203ENST00000467558 HMGN3Q15651 99 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 ZNF674Q2M3X9 581 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 ARTNQ5T4W7 220 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 FBXW9Q5XUX1 488 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 TMEM108Q6UXF1 575 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 BAP18Q8IXM2 172 aa12.15□□□□□ -0.46
BRAT1-203ENST00000467558 A8MXE2 369 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 SNRNP70P08621 437 aaKnown RBP12.14□□□□□ -0.47
BRAT1-203ENST00000467558 SOHLH1Q5JUK2 328 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 RFLNBQ8N5W9 214 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 APCDD1LQ8NCL9 501 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 OR2G3Q8NGZ4 309 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 TMED6Q8WW62 240 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 IGLV1-36A0A0B4J1U3 117 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 NGFP01138 241 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 ALDH3B1P43353 468 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 KIR3DL2P43630 455 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 OR2B11Q5JQS5 317 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 TSPO2Q5TGU0 170 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 CXorf67Q86X51 503 aaPredicted RBP12.14□□□□□ -0.47
BRAT1-203ENST00000467558 MUC20Q8N307 709 aaPredicted RBP12.14□□□□□ -0.47
BRAT1-203ENST00000467558 GNPNAT1Q96EK6 184 aaPredicted RBP12.14□□□□□ -0.47
BRAT1-203ENST00000467558 KCNK15Q9H427 330 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms