RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 ZNF573Q86YE8 665 aa11.65□□□□□ -0.54
CCHCR1-211ENST00000467553 CCDC54Q8NEL0 328 aa11.65□□□□□ -0.54
CCHCR1-211ENST00000467553 TRMT10AQ8TBZ6 339 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-211ENST00000467553 NPRL2Q8WTW4 380 aa11.65□□□□□ -0.54
CCHCR1-211ENST00000467553 ST8SIA4Q92187 359 aa11.65□□□□□ -0.54
CCHCR1-211ENST00000467553 AQP3Q92482 292 aa11.65□□□□□ -0.54
CCHCR1-211ENST00000467553 TMIGD2Q96BF3 282 aa11.65□□□□□ -0.54
CCHCR1-211ENST00000467553 PELI1Q96FA3 418 aa11.65□□□□□ -0.54
CCHCR1-211ENST00000467553 ISG20L2Q9H9L3 353 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-211ENST00000467553 SMURF1Q9HCE7 757 aa11.65□□□□□ -0.54
CCHCR1-211ENST00000467553 MRPS18AQ9NVS2 196 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-211ENST00000467553 ERVK13-1Q9NX77 482 aa11.65□□□□□ -0.54
CCHCR1-211ENST00000467553 SLC7A11Q9UPY5 501 aa11.65□□□□□ -0.54
CCHCR1-211ENST00000467553 MEGF8Q7Z7M0 2845 aa11.65□□□□□ -0.54
CCHCR1-211ENST00000467553 CMYA5Q8N3K9 4069 aa11.65□□□□□ -0.55
CCHCR1-211ENST00000467553 A0A1B0GW55 424 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 ANKRD61A6NGH8 418 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 C22orf46C9J442 243 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 CASQ2O14958 399 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 NDUFB3O43676 98 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 SYNGR1O43759 233 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 ENSAO43768 121 aaKnown RBP11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 IGHA1P01876 353 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 TFF1P04155 84 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 DUX4L2P0CJ85 424 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 DUX4L3P0CJ86 424 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 DUX4L4P0CJ87 422 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 DUX4L5P0CJ88 424 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 DUX4L6P0CJ89 424 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 DUX4L7P0CJ90 424 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 GABRA2P47869 451 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 IKZF1Q13422 519 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 ALKBH1Q13686 389 aaKnown RBP11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 SLC9A3R2Q15599 337 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 UBE2V2Q15819 145 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 FDX2Q6P4F2 183 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 C16orf87Q6PH81 154 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 DUX4L9Q6RFH8 374 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 BTN2A1Q7KYR7 527 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 SLC36A1Q7Z2H8 476 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 ANGPTL5Q86XS5 388 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 BCL6BQ8N143 479 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 FGFRL1Q8N441 504 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 ZNF676Q8N7Q3 588 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 SETD9Q8NE22 299 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 FGGYQ96C11 551 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 C1orf147Q96MC9 270 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 ZNF488Q96MN9 340 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 ZNF48Q96MX3 618 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 FGF20Q9NP95 211 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 NOX4Q9NPH5 578 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 INPP5EQ9NRR6 644 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 KAAG1Q9UBP8 84 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 DUX4Q9UBX2 424 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 NKX1-2Q9UD57 310 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 MMP24Q9Y5R2 645 aa11.64□□□□□ -0.55
CCHCR1-211ENST00000467553 IGHV3OR16-10A0A075B7F0 116 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 PQLC2LA1A4F0 135 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 OR2AT4A6NND4 320 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 FCN3O75636 299 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 INMTO95050 263 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 IGHV4-38-2P0DP08 117 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 AMY2BP19961 511 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 CAPGP40121 348 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 CCR9P51686 369 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 GBX2P52951 348 aaPredicted RBP11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 GPR157Q5UAW9 335 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 STUMQ69YW2 141 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 BATF2Q8N1L9 274 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 SYS1Q8N2H4 156 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 TMEM86BQ8N661 226 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 FAM216BQ8N7L0 139 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 C12orf43Q96C57 262 aaKnown RBP11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 MED30Q96HR3 178 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 ZNF649Q9BS31 505 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 VCXQ9H320 206 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 UNKLQ9H9P5 680 aaKnown RBP11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 NLKQ9UBE8 527 aa11.63□□□□□ -0.55
CCHCR1-211ENST00000467553 NKX6-3A6NJ46 265 aa11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 E9PI62 339 aa11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 J3QT63 122 aa11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 GATBO75879 557 aaKnown RBP11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 ECDO95905 644 aaPredicted RBP11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 ISG15P05161 165 aa11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 PSG2P11465 335 aa11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 ZNF20P17024 532 aa11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 TGM4P49221 684 aa11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 ETV1P50549 477 aa11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 FUT6P51993 359 aa11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 RPL15P61313 204 aaKnown RBP11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 FGF12P61328 243 aa11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 SLC34A1Q06495 639 aa11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 LRRC10Q5BKY1 277 aa11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 ATPAF1Q5TC12 328 aaPredicted RBP11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 CALHM1Q8IU99 346 aa11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 PNLDC1Q8NA58 520 aaKnown RBP11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 OR13C3Q8NGS6 347 aa11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 OR10AC1Q8NH08 325 aa11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 ANGPTL6Q8NI99 470 aa11.62□□□□□ -0.55
CCHCR1-211ENST00000467553 C10orf35Q96D05 121 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms