RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 OR13C9Q8NGT0 318 aa9.22□□□□□ -0.93
MSH5-212ENST00000467319 TRMT10AQ8TBZ6 339 aaKnown RBP9.22□□□□□ -0.93
MSH5-212ENST00000467319 NPRL2Q8WTW4 380 aa9.22□□□□□ -0.93
MSH5-212ENST00000467319 TSEN15Q8WW01 171 aaKnown RBP9.22□□□□□ -0.93
MSH5-212ENST00000467319 NEIL1Q96FI4 390 aaPredicted RBP9.22□□□□□ -0.93
MSH5-212ENST00000467319 WDR13Q9H1Z4 485 aa9.22□□□□□ -0.93
MSH5-212ENST00000467319 HES4Q9HCC6 221 aa9.22□□□□□ -0.93
MSH5-212ENST00000467319 KAAG1Q9UBP8 84 aa9.22□□□□□ -0.93
MSH5-212ENST00000467319 MIOXQ9UGB7 285 aa9.22□□□□□ -0.93
MSH5-212ENST00000467319 POLDIP2Q9Y2S7 368 aa9.22□□□□□ -0.93
MSH5-212ENST00000467319 ZNF281Q9Y2X9 895 aa9.22□□□□□ -0.93
MSH5-212ENST00000467319 TRBV5-7A0A0A0MS05 114 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 PPIAL4CA0A0B4J2A2 164 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 INAFM1C9JVW0 142 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 AKR7A2O43488 359 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 SULT1B1O43704 296 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 SYNGR1O43759 233 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 SERPINA3P01011 423 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 TGFAP01135 160 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 FSTP19883 344 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 AMY2BP19961 511 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 PRKACBP22694 351 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 ZFP36P26651 326 aaKnown RBP9.21□□□□□ -0.94
MSH5-212ENST00000467319 PAX2Q02962 417 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 IL24Q13007 206 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 SFRP4Q6FHJ7 346 aaPredicted RBP9.21□□□□□ -0.94
MSH5-212ENST00000467319 LYPD2Q6UXB3 125 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 ZNF841Q6ZN19 808 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 GLCCI1Q86VQ1 547 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 BOLLQ8N9W6 283 aaKnown RBP9.21□□□□□ -0.94
MSH5-212ENST00000467319 DEFB108BQ8NET1 73 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 TMEM106AQ96A25 262 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 TMEM186Q96B77 213 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 SEH1LQ96EE3 360 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 OPALINQ96PE5 141 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 DNTTIP1Q9H147 329 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 ZCCHC4Q9H5U6 513 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 SMURF1Q9HCE7 757 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 YAE1D1Q9NRH1 226 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 ZNF222Q9UK12 451 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 SLC7A11Q9UPY5 501 aa9.21□□□□□ -0.94
MSH5-212ENST00000467319 IGKV1D-17A0A075B6S4 117 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 IGHV3OR15-7A0A075B7D8 119 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 FAM230AA0A1W2PPH8 454 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 NDUFA2O43678 99 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 FOXH1O75593 365 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 CD2P06729 351 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 OCM2P0CE71 109 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 CELP19835 753 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 SOX2P48431 317 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 PITPNBP48739 271 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 RBP2P50120 134 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 MICBQ29980 383 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 SMIM21Q3B7S5 101 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 Q499Y3 187 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 ESCO2Q56NI9 601 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 ATPAF1Q5TC12 328 aaPredicted RBP9.2□□□□□ -0.94
MSH5-212ENST00000467319 LHFPL2Q6ZUX7 228 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 NLRC3Q7RTR2 1065 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 RNF144BQ7Z419 303 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 SERPINA12Q8IW75 414 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 OR8B3Q8NGG8 313 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 OR51A2Q8NGJ7 313 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 ANGPTL6Q8NI99 470 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 BORCS8Q96FH0 119 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 ZNF488Q96MN9 340 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 OR8B2Q96RD0 313 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 SSBP3Q9BWW4 388 aaPredicted RBP9.2□□□□□ -0.94
MSH5-212ENST00000467319 LPAR2Q9HBW0 351 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 HIF1ANQ9NWT6 349 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 TAS2R4Q9NYW5 299 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 KCNS2Q9ULS6 477 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 PCDHB10Q9UN67 800 aa9.2□□□□□ -0.94
MSH5-212ENST00000467319 JMJD1CQ15652 2540 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 PNMA8CA0A1B0GUJ8 204 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 A0A1B0GW55 424 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 PHF1O43189 567 aaPredicted RBP9.19□□□□□ -0.94
MSH5-212ENST00000467319 ADAM20O43506 726 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 MRPS14O60783 128 aaKnown RBP9.19□□□□□ -0.94
MSH5-212ENST00000467319 GPX5O75715 221 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 SC5DO75845 299 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 GYPAP02724 150 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 DUX4L2P0CJ85 424 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 DUX4L3P0CJ86 424 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 DUX4L4P0CJ87 422 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 DUX4L5P0CJ88 424 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 DUX4L6P0CJ89 424 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 DUX4L7P0CJ90 424 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 IGFBP3P17936 291 aaPredicted RBP9.19□□□□□ -0.94
MSH5-212ENST00000467319 GLRA1P23415 457 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 MAP2K4P45985 399 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 ZP1P60852 638 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 LCN2P80188 198 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 MLLT11Q13015 90 aaPredicted RBP9.19□□□□□ -0.94
MSH5-212ENST00000467319 GPR50Q13585 617 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 TPBGQ13641 420 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 WDR25Q64LD2 544 aaPredicted RBP9.19□□□□□ -0.94
MSH5-212ENST00000467319 DUX4L9Q6RFH8 374 aaPredicted RBP9.19□□□□□ -0.94
MSH5-212ENST00000467319 ACP7Q6ZNF0 438 aa9.19□□□□□ -0.94
MSH5-212ENST00000467319 ANGPTL5Q86XS5 388 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms