RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 IL1RNP18510 177 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 MAGEA3P43357 314 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 OR2B6P58173 313 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 TAS2R43P59537 309 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 RPL10AP62906 217 aaKnown RBP2.47□□□□□ -2.01
VPS13A-209ENST00000467124 ELF3P78545 371 aaPredicted RBP2.47□□□□□ -2.01
VPS13A-209ENST00000467124 CDNFQ49AH0 187 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 ZNF880Q6PDB4 577 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 CLEC19AQ6UXS0 136 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 AHSA2Q719I0 299 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 UBALD2Q8IYN6 164 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 GAPTQ8N292 157 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 OR8G5Q8NG78 346 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 OR4K2Q8NGD2 314 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 OR2AE1Q8NHA4 323 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 SFXN5Q8TD22 340 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 DOK4Q8TEW6 326 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 CCDC124Q96CT7 223 aaKnown RBP2.47□□□□□ -2.01
VPS13A-209ENST00000467124 SNF8Q96H20 258 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 SMIM8Q96KF7 97 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 EXOSC4Q9NPD3 245 aaKnown RBP2.47□□□□□ -2.01
VPS13A-209ENST00000467124 NRBP2Q9NSY0 501 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 CYB5R1Q9UHQ9 305 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 YEATS2Q9ULM3 1422 aa2.47□□□□□ -2.01
VPS13A-209ENST00000467124 IGKV1-6A0A0C4DH72 117 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 A0A0G2JMP0 313 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 A0A0X1KG70 313 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 RCBTB2O95199 551 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 TNFAIP8O95379 198 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 LDOC1O95751 146 aaPredicted RBP2.46□□□□□ -2.02
VPS13A-209ENST00000467124 CYB5R3P00387 301 aaPredicted RBP2.46□□□□□ -2.02
VPS13A-209ENST00000467124 IGKV1-39P01597 117 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 IGKV1D-39P04432 117 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 CISD3P0C7P0 127 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 ZNF286BP0CG31 522 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 M6PRP20645 277 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 SYT1P21579 422 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 TUFMP49411 452 aaKnown RBP2.46□□□□□ -2.02
VPS13A-209ENST00000467124 VSNL1P62760 191 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 EIF4EBP1Q13541 118 aaPredicted RBP2.46□□□□□ -2.02
VPS13A-209ENST00000467124 COX19Q49B96 90 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 SYT6Q5T7P8 510 aaPredicted RBP2.46□□□□□ -2.02
VPS13A-209ENST00000467124 SSX6Q7RTT6 188 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 ITPRIPQ8IWB1 547 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 BBS7Q8IWZ6 715 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 ZNF101Q8IZC7 436 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 STK40Q8N2I9 435 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 OR2M7Q8NG81 312 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 OR2Z1Q8NG97 314 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 ZFAND1Q8TCF1 268 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 DOK1Q99704 481 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 CTRCQ99895 268 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 PLEKHF2Q9H8W4 249 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 SND1-IT1Q9HBX3 110 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 C12orf4Q9NQ89 552 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 OR2S2Q9NQN1 319 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 TFR2Q9UP52 801 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 CBY1Q9Y3M2 126 aa2.46□□□□□ -2.02
VPS13A-209ENST00000467124 CENPVL3A0A0U1RRI6 287 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 RBFOX3A6NFN3 312 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 BTNL10A8MVZ5 291 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 SMLR1H3BR10 107 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 GATCO43716 136 aaKnown RBP2.45□□□□□ -2.02
VPS13A-209ENST00000467124 SHOX2O60902 331 aaPredicted RBP2.45□□□□□ -2.02
VPS13A-209ENST00000467124 BRI3O95415 125 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 CD8AP01732 235 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 SEC11BP0C7V7 166 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 PRSS3P35030 304 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 MAGEA6P43360 314 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 DNASE1L1P49184 302 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 TPBGQ13641 420 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 MOBPQ13875 183 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 PSG3Q16557 428 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 LINC00337Q8N6G1 96 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 LRRC52Q8N7C0 313 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 SLC25A29Q8N8R3 303 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 DRAXINQ8NBI3 349 aaPredicted RBP2.45□□□□□ -2.02
VPS13A-209ENST00000467124 OR9A2Q8NGT5 310 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 BLNKQ8WV28 456 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 TMEM239Q8WW34 195 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 IFT81Q8WYA0 676 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 ZFP3Q96NJ6 502 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 QKIQ96PU8 341 aaKnown RBP eCLIP2.45□□□□□ -2.02
VPS13A-209ENST00000467124 DERL3Q96Q80 235 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 CYTH2Q99418 400 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 MRPL20Q9BYC9 149 aaKnown RBP2.45□□□□□ -2.02
VPS13A-209ENST00000467124 SHCBP1LQ9BZQ2 653 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 SPACA1Q9HBV2 294 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 MS4A12Q9NXJ0 267 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 PRO0628Q9UI54 55 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 RAB22AQ9UL26 194 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 SLC7A11Q9UPY5 501 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 ACOT9Q9Y305 439 aa2.45□□□□□ -2.02
VPS13A-209ENST00000467124 IGKV2-28A0A075B6P5 120 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 TRPC5OSA6NMA1 111 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 ZNF850A8MQ14 1090 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 CEACAM18A8MTB9 384 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 ZNF593O00488 134 aaPredicted RBP2.44□□□□□ -2.02
VPS13A-209ENST00000467124 IGKV2D-28P01615 120 aa2.44□□□□□ -2.02
VPS13A-209ENST00000467124 IL4P05112 153 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms