RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 SSX3Q99909 188 aa15.62■□□□□ 0.09
COL9A3-206ENST00000466532 TCRBV3S1A0A5B6 114 aa15.61■□□□□ 0.09
COL9A3-206ENST00000466532 SLC1A7O00341 560 aa15.61■□□□□ 0.09
COL9A3-206ENST00000466532 SYNGR1O43759 233 aa15.61■□□□□ 0.09
COL9A3-206ENST00000466532 PRKYO43930 277 aa15.61■□□□□ 0.09
COL9A3-206ENST00000466532 HAAOP46952 286 aa15.61■□□□□ 0.09
COL9A3-206ENST00000466532 PTGES3Q15185 160 aaKnown RBP15.61■□□□□ 0.09
COL9A3-206ENST00000466532 LY6EQ16553 131 aa15.61■□□□□ 0.09
COL9A3-206ENST00000466532 C2orf68Q2NKX9 166 aa15.61■□□□□ 0.09
COL9A3-206ENST00000466532 MKXQ8IYA7 352 aa15.61■□□□□ 0.09
COL9A3-206ENST00000466532 ZNF561Q8N587 486 aa15.61■□□□□ 0.09
COL9A3-206ENST00000466532 CD177Q8N6Q3 437 aa15.61■□□□□ 0.09
COL9A3-206ENST00000466532 FAM110DQ8TAY7 271 aaPredicted RBP15.61■□□□□ 0.09
COL9A3-206ENST00000466532 RORBQ92753 470 aa15.61■□□□□ 0.09
COL9A3-206ENST00000466532 NRBF2Q96F24 287 aa15.61■□□□□ 0.09
COL9A3-206ENST00000466532 FAM234AQ9H0X4 552 aa15.61■□□□□ 0.09
COL9A3-206ENST00000466532 FBLN5Q9UBX5 448 aa15.61■□□□□ 0.09
COL9A3-206ENST00000466532 PRKDCP78527 4128 aaKnown RBP15.61■□□□□ 0.09
COL9A3-206ENST00000466532 A0A1W2PPH5 198 aa15.6■□□□□ 0.09
COL9A3-206ENST00000466532 LOC110117498-PIK3R3F6TDL0 507 aa15.6■□□□□ 0.09
COL9A3-206ENST00000466532 SRSF10O75494 262 aaKnown RBP15.6■□□□□ 0.09
COL9A3-206ENST00000466532 PGA5P0DJD9 388 aa15.6■□□□□ 0.09
COL9A3-206ENST00000466532 GABRA5P31644 462 aa15.6■□□□□ 0.09
COL9A3-206ENST00000466532 CEBPDP49716 269 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-206ENST00000466532 DAPP51397 102 aa15.6■□□□□ 0.09
COL9A3-206ENST00000466532 CXCR4P61073 352 aa15.6■□□□□ 0.09
COL9A3-206ENST00000466532 ESRRGP62508 458 aa15.6■□□□□ 0.09
COL9A3-206ENST00000466532 CLVS2Q5SYC1 327 aa15.6■□□□□ 0.09
COL9A3-206ENST00000466532 FAHD1Q6P587 224 aa15.6■□□□□ 0.09
COL9A3-206ENST00000466532 ZNF322Q6U7Q0 402 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-206ENST00000466532 BCDIN3DQ7Z5W3 292 aaKnown RBP15.6■□□□□ 0.09
COL9A3-206ENST00000466532 ZNF573Q86YE8 665 aa15.6■□□□□ 0.09
COL9A3-206ENST00000466532 OR5K1Q8NHB7 308 aa15.6■□□□□ 0.09
COL9A3-206ENST00000466532 PRRG3Q9BZD7 231 aa15.6■□□□□ 0.09
COL9A3-206ENST00000466532 MOB1AQ9H8S9 216 aa15.6■□□□□ 0.09
COL9A3-206ENST00000466532 GPR173Q9NS66 373 aa15.6■□□□□ 0.09
COL9A3-206ENST00000466532 POMPQ9Y244 141 aa15.6■□□□□ 0.09
COL9A3-206ENST00000466532 J3QT63 122 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 M0R129 80 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 MAGEB4O15481 346 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-206ENST00000466532 PRDX2P32119 198 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 RPL31P62899 125 aaKnown RBP15.59■□□□□ 0.09
COL9A3-206ENST00000466532 LRRC75BQ2VPJ9 315 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 BCL2L15Q5TBC7 163 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 TMEM200BQ69YZ2 307 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 PLEKHG7Q6ZR37 379 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 MEPCEQ7L2J0 689 aaKnown RBP15.59■□□□□ 0.09
COL9A3-206ENST00000466532 SLC35F2Q8IXU6 374 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 BATF2Q8N1L9 274 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 PPP1R35Q8TAP8 253 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 AJUBAQ96IF1 538 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 APOL4Q9BPW4 351 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 MEGF9Q9H1U4 602 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 H2AFY2Q9P0M6 372 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-206ENST00000466532 POLDIP2Q9Y2S7 368 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 SIGLEC9Q9Y336 463 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 R4GMQ9 66 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 V9GYS6 101 aa15.59■□□□□ 0.09
COL9A3-206ENST00000466532 PLXNB1O43157 2135 aa15.58■□□□□ 0.08
COL9A3-206ENST00000466532 DLGAP1O14490 977 aa15.58■□□□□ 0.08
COL9A3-206ENST00000466532 NXPH2O95156 264 aa15.58■□□□□ 0.08
COL9A3-206ENST00000466532 CSF1P09603 554 aa15.58■□□□□ 0.08
COL9A3-206ENST00000466532 PAX6P26367 422 aa15.58■□□□□ 0.08
COL9A3-206ENST00000466532 ACTR3P61158 418 aa15.58■□□□□ 0.08
COL9A3-206ENST00000466532 TMEM42Q69YG0 159 aa15.58■□□□□ 0.08
COL9A3-206ENST00000466532 ASRGL1Q7L266 308 aa15.58■□□□□ 0.08
COL9A3-206ENST00000466532 TCEANCQ8N8B7 351 aa15.58■□□□□ 0.08
COL9A3-206ENST00000466532 OR4M1Q8NGD0 313 aa15.58■□□□□ 0.08
COL9A3-206ENST00000466532 OR4C13Q8NGP0 309 aa15.58■□□□□ 0.08
COL9A3-206ENST00000466532 HEXA-AS1Q9H8Q6 139 aa15.58■□□□□ 0.08
COL9A3-206ENST00000466532 OR14J1Q9UGF5 321 aa15.58■□□□□ 0.08
COL9A3-206ENST00000466532 OR52A1Q9UKL2 312 aa15.58■□□□□ 0.08
COL9A3-206ENST00000466532 hCG_1809904A0A1W2PP81 198 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 A0A1W2PPE2 198 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 A0A1W2PR64 198 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 A0A1W2PRV1 198 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 PQLC2LA1A4F0 135 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 A6NIN4 97 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 ZNF670-ZNF695F2Z2N8 137 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 NOS1APO75052 506 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-206ENST00000466532 COX7A1P24310 79 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 HERPUD1Q15011 391 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 AANATQ16613 207 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 NXNL2Q5VZ03 156 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 Q6ZTK2 550 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 C1QL4Q86Z23 238 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 ELMOD2Q8IZ81 293 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 C11orf42Q8N5U0 333 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 OR14K1Q8NGZ2 314 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 OR2T27Q8NH04 317 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 UTP4Q969X6 686 aaKnown RBP15.57■□□□□ 0.08
COL9A3-206ENST00000466532 SLC7A6OSQ96CW6 309 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-206ENST00000466532 MNTQ99583 582 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 NRIP2Q9BQI9 281 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 ADGRL4Q9HBW9 690 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 KRT84Q9NSB2 600 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 USE1Q9NZ43 259 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 SNX5Q9Y5X3 404 aa15.57■□□□□ 0.08
COL9A3-206ENST00000466532 A0A1B0GTI1 187 aa15.56■□□□□ 0.08
COL9A3-206ENST00000466532 MITFO75030 526 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms