RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.72□□□□□ -1.01
PMF1-204ENST00000466489 SLC25A42Q86VD7 318 aa8.72□□□□□ -1.01
PMF1-204ENST00000466489 TMEM123Q8N131 208 aa8.72□□□□□ -1.01
PMF1-204ENST00000466489 C17orf78Q8N4C9 275 aa8.72□□□□□ -1.01
PMF1-204ENST00000466489 KCNRGQ8N5I3 272 aa8.72□□□□□ -1.01
PMF1-204ENST00000466489 BEST4Q8NFU0 473 aa8.72□□□□□ -1.01
PMF1-204ENST00000466489 OR4C16Q8NGL9 310 aa8.72□□□□□ -1.01
PMF1-204ENST00000466489 OR13C3Q8NGS6 347 aa8.72□□□□□ -1.01
PMF1-204ENST00000466489 SEH1LQ96EE3 360 aa8.72□□□□□ -1.01
PMF1-204ENST00000466489 ALKBH3Q96Q83 286 aaPredicted RBP8.72□□□□□ -1.01
PMF1-204ENST00000466489 PDCD10Q9BUL8 212 aa8.72□□□□□ -1.01
PMF1-204ENST00000466489 EMC6Q9BV81 110 aa8.72□□□□□ -1.01
PMF1-204ENST00000466489 ULBP2Q9BZM5 246 aa8.72□□□□□ -1.01
PMF1-204ENST00000466489 CST11Q9H112 138 aa8.72□□□□□ -1.01
PMF1-204ENST00000466489 SYT4Q9H2B2 425 aa8.72□□□□□ -1.01
PMF1-204ENST00000466489 IFT46Q9NQC8 304 aa8.72□□□□□ -1.01
PMF1-204ENST00000466489 SLC7A10Q9NS82 523 aa8.72□□□□□ -1.01
PMF1-204ENST00000466489 ALPK2Q86TB3 2170 aa8.72□□□□□ -1.01
PMF1-204ENST00000466489 TMEM269A0A1B0GVZ9 245 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 A6NIN4 97 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 SMLR1H3BR10 107 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 C19orf84I3L1E1 186 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 ARPC5O15511 151 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 TPD52L2O43399 206 aaKnown RBP8.71□□□□□ -1.02
PMF1-204ENST00000466489 DOK2O60496 412 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 RAD51DO75771 328 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 LYZL6O75951 148 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 FARS2O95363 451 aaKnown RBP8.71□□□□□ -1.02
PMF1-204ENST00000466489 DUS4LO95620 317 aaKnown RBP8.71□□□□□ -1.02
PMF1-204ENST00000466489 AMY2AP04746 511 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 FGF2P09038 288 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 SPARCP09486 303 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 H2BFMP0C1H6 154 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 IGFBP3P17936 291 aaPredicted RBP8.71□□□□□ -1.02
PMF1-204ENST00000466489 IGFBP2P18065 325 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 ANXA7P20073 488 aaKnown RBP8.71□□□□□ -1.02
PMF1-204ENST00000466489 PRKACBP22694 351 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 IGHV1-2P23083 117 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 GNALP38405 381 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 SOX2P48431 317 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 PRKXP51817 358 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 HCCSP53701 268 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 TAS2R46P59540 309 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 UBE2NP61088 152 aaKnown RBP8.71□□□□□ -1.02
PMF1-204ENST00000466489 EIF2B1Q14232 305 aaKnown RBP8.71□□□□□ -1.02
PMF1-204ENST00000466489 MELKQ14680 651 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 HMGN3Q15651 99 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 MESTQ5EB52 335 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 WDR38Q5JTN6 314 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 NKAPLQ5M9Q1 402 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 TIMM23BQ5SRD1 257 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 Q6ZTK2 550 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 PEG10Q86TG7 708 aaKnown RBP8.71□□□□□ -1.02
PMF1-204ENST00000466489 C20orf196Q8IYI0 205 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 PNLDC1Q8NA58 520 aaKnown RBP8.71□□□□□ -1.02
PMF1-204ENST00000466489 NOXO1Q8NFA2 376 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 PXT1Q8NFP0 134 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 OR51D1Q8NGF3 324 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 OR56B1Q8NGI3 324 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 OR51S1Q8NGJ8 323 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 OR5M8Q8NGP6 311 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 OR13C5Q8NGS8 318 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 OR2AJ1Q8NGZ0 328 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 COQ8AQ8NI60 647 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 MITD1Q8WV92 249 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 ASB10Q8WXI3 467 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 NANOS1Q8WY41 292 aaKnown RBP8.71□□□□□ -1.02
PMF1-204ENST00000466489 RGP1Q92546 391 aaPredicted RBP8.71□□□□□ -1.02
PMF1-204ENST00000466489 CHIAQ9BZP6 476 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 NMES1Q9C002 83 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 SHARPINQ9H0F6 387 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 CRLF2Q9HC73 371 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 OBP2BQ9NPH6 170 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 OR52A1Q9UKL2 312 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 AMDHD2Q9Y303 409 aa8.71□□□□□ -1.02
PMF1-204ENST00000466489 COL12A1Q99715 3063 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 FXYD6-FXYD2A0A087WZ82 144 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 IGLV1-36A0A0B4J1U3 117 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 MPTX1A8MV57 137 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 RPL36A-HNRNPH2H7BZ11 118 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 GOSR2O14653 212 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 BCL2L11O43521 198 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 MPC2O95563 127 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 ACSM4P0C7M7 580 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 TPT1P13693 172 aaKnown RBP8.7□□□□□ -1.02
PMF1-204ENST00000466489 HOXB1P14653 301 aaPredicted RBP8.7□□□□□ -1.02
PMF1-204ENST00000466489 ADRA2CP18825 462 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 SSTR2P30874 369 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 GRB2P62993 217 aaKnown RBP8.7□□□□□ -1.02
PMF1-204ENST00000466489 IL13RA1P78552 427 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 MADCAM1Q13477 382 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 CEACAM16Q2WEN9 425 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 GFOD2Q3B7J2 385 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 TMEM128Q5BJH2 165 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 C9orf135Q5VTT2 229 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 C11orf87Q6NUJ2 197 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 ZNF627Q7L945 461 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 LYG2Q86SG7 212 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 LSRQ86X29 649 aaPredicted RBP8.7□□□□□ -1.02
PMF1-204ENST00000466489 SVBPQ8N300 66 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms