RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 ADGRL4Q9HBW9 690 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 SRA1Q9HD15 236 aaKnown RBP11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 SIRT7Q9NRC8 400 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 DAPL1A0PJW8 107 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 MEIOCA2RUB1 952 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 DPPA5A6NC42 116 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 C12orf71A8MTZ7 269 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 APOL3O95236 402 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 HLA-DQA2P01906 255 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 PF4P02776 101 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 MRPL3P09001 348 aaKnown RBP11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 OR2T7P0C7T2 308 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 PYCR1P32322 319 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 MAP2K4P45985 399 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 WNT4P56705 351 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 ACTA2P62736 377 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 ACTG2P63267 376 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 MED22Q15528 200 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 NKAPLQ5M9Q1 402 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 SYT6Q5T7P8 510 aaPredicted RBP11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 LINC01590Q5TEZ4 76 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 SHFQ7M4L6 423 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 SLC16A9Q7RTY1 509 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 SLC35F2Q8IXU6 374 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 OR6V1Q8N148 313 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 OR51L1Q8NGJ5 315 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 OR2T27Q8NH04 317 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 OR52N1Q8NH53 320 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 ERGIC1Q969X5 290 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 MAP6Q96JE9 813 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 INTS14Q96SY0 518 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 SSX3Q99909 188 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 GPR61Q9BZJ8 451 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 B9D1Q9UPM9 204 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 TMEM14AQ9Y6G1 99 aa11.97□□□□□ -0.49
HMGXB4-206ENST00000466438 IGLV1-36A0A0B4J1U3 117 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 IGKV1D-43A0A0B4J1Z2 117 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 A0A1W2PRD5 423 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 A0A1W2PRF3 423 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 A0A1W2PRM7 423 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 A0A1W2PRX2 142 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 A6NHS1 94 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 ZNF670-ZNF695F2Z2N8 137 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 J3QRE1 110 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 NDUFA2O43678 99 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 COX5BP10606 129 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 LYL1P12980 280 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 CTLA4P16410 223 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 LAP3P28838 519 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 NAA10P41227 235 aaPredicted RBP11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 TIGD6Q17RP2 521 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 ERI1Q8IV48 349 aaKnown RBP11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 NANOGP1Q8N7R0 232 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 OR13F1Q8NGS4 319 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 NMD3Q96D46 503 aaKnown RBP11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 TSSK2Q96PF2 358 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 YIPF3Q9GZM5 350 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 ZNF702PQ9H963 129 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 ERVK13-1Q9NX77 482 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 ONECUT1Q9UBC0 465 aa11.96□□□□□ -0.49
HMGXB4-206ENST00000466438 CCDC160A6NGH7 325 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 LGALS8O00214 317 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 DVL1O14640 695 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 ANGPTL7O43827 346 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 FCN3O75636 299 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 INMTO95050 263 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 GUCA1AP43080 201 aaPredicted RBP11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 ETV1P50549 477 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 HOXA4Q00056 320 aaPredicted RBP11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 PRB3Q04118 309 aaPredicted RBP11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 FMODQ06828 376 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 ACSM1Q08AH1 577 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 GALEQ14376 348 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 HABP2Q14520 560 aaPredicted RBP11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 SPHARQ15513 63 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 SFRP4Q6FHJ7 346 aaPredicted RBP11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 OR2T2Q6IF00 324 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 FBXW12Q6X9E4 464 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 LIAT1Q6ZQX7 453 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 GLB1L2Q8IW92 636 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 CMTM4Q8IZR5 234 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 Q8N2B8 174 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 CELF2-AS1Q8N7Q2 184 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 OR6N2Q8NGY6 317 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 HAVCR2Q8TDQ0 301 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 ALG8Q9BVK2 526 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 WDR76Q9H967 626 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 PALMDQ9NP74 551 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 ISYNA1Q9NPH2 558 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 TRIM36Q9NQ86 728 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 PCLOQ9Y6V0 5065 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 CSMD3Q7Z407 3707 aa11.95□□□□□ -0.5
HMGXB4-206ENST00000466438 A0A1B0GWJ7 208 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 MEGF11A6BM72 1044 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 DCTN6O00399 190 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 CHST1O43916 411 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 SELENOFO60613 162 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 LIMS3P0CW19 117 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 LIMS4P0CW20 117 aa11.94□□□□□ -0.5
HMGXB4-206ENST00000466438 HSMCR30P0CW71 290 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms