RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 TMEM82A0PJX8 343 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 CCL21O00585 134 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 PRB1P04280 392 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 ACSM4P0C7M7 580 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 RPA2P15927 270 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 OPRM1P35372 400 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 H2BFSP57053 126 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 MEF2DQ14814 521 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 C4orf46Q504U0 113 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 CLVS2Q5SYC1 327 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 LPCAT3Q6P1A2 487 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 C22orf34Q6ZV56 151 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 ZNF75AQ96N20 296 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 NARFLQ9H6Q4 476 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 RDH8Q9NYR8 311 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 ZNF629Q9UEG4 869 aaPredicted RBP16.09■□□□□ 0.17
CAPN3-209ENST00000466222 SESN1Q9Y6P5 492 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 DOCK7Q96N67 2140 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 C5orf49A4QMS7 147 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 METTL21EPA6NDL7 271 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 CYB5AP00167 134 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 MPZP25189 248 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 KRTAP27-1Q3LI81 207 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 ALKBH2Q6NS38 261 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 FJX1Q86VR8 437 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 LYPD6Q86Y78 171 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 PAQR4Q8N4S7 273 aaPredicted RBP16.09■□□□□ 0.17
CAPN3-209ENST00000466222 C12orf45Q8N5I9 185 aaPredicted RBP16.09■□□□□ 0.17
CAPN3-209ENST00000466222 RND1Q92730 232 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 SPTSSAQ969W0 71 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 KCNK15Q9H427 330 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 RAB22AQ9UL26 194 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 COL6A6A6NMZ7 2263 aa16.09■□□□□ 0.17
CAPN3-209ENST00000466222 RFPL4AA6NLU0 287 aa16.08■□□□□ 0.16
CAPN3-209ENST00000466222 RFPL4AL1F8VTS6 287 aa16.08■□□□□ 0.16
CAPN3-209ENST00000466222 ARPC5O15511 151 aa16.08■□□□□ 0.16
CAPN3-209ENST00000466222 UQCRFS1P47985 274 aa16.08■□□□□ 0.16
CAPN3-209ENST00000466222 UBE2NP61088 152 aaKnown RBP16.08■□□□□ 0.16
CAPN3-209ENST00000466222 P2RY6Q15077 328 aa16.08■□□□□ 0.16
CAPN3-209ENST00000466222 C11orf88Q6PI97 169 aa16.08■□□□□ 0.16
CAPN3-209ENST00000466222 BHLHA15Q7RTS1 189 aaPredicted RBP16.08■□□□□ 0.16
CAPN3-209ENST00000466222 OR8S1Q8NH09 359 aa16.08■□□□□ 0.16
CAPN3-209ENST00000466222 LYZL4Q96KX0 146 aa16.08■□□□□ 0.16
CAPN3-209ENST00000466222 NUDT16L1Q9BRJ7 211 aaKnown RBP16.08■□□□□ 0.16
CAPN3-209ENST00000466222 SLC2A8Q9NY64 477 aa16.08■□□□□ 0.16
CAPN3-209ENST00000466222 A0A1B0GTI1 187 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 MEIS3P1A6NDR6 274 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 ZNF736B4DX44 427 aaPredicted RBP16.07■□□□□ 0.16
CAPN3-209ENST00000466222 DISC1C4P0D8 188 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 MSTNO14793 375 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 OR4E1P0C645 316 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 ARR3P36575 388 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 CASP6P55212 293 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 SRSF4Q08170 494 aaKnown RBP16.07■□□□□ 0.16
CAPN3-209ENST00000466222 FGL1Q08830 312 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 GK2Q14410 553 aaPredicted RBP16.07■□□□□ 0.16
CAPN3-209ENST00000466222 JAGN1Q8N5M9 183 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 OR2AE1Q8NHA4 323 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 S100PBPQ96BU1 408 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 PGAM5Q96HS1 289 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 POFUT1Q9H488 388 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 CGGBP1Q9UFW8 167 aaPredicted RBP16.07■□□□□ 0.16
CAPN3-209ENST00000466222 POLEQ07864 2286 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 FXYD6-FXYD2A0A087WZ82 144 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 LCATP04180 440 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 AMY2AP04746 511 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 ZP3P21754 424 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 GSK3AP49840 483 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 IDH3GP51553 393 aaPredicted RBP16.07■□□□□ 0.16
CAPN3-209ENST00000466222 ECH1Q13011 328 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 C2orf68Q2NKX9 166 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 GSG1LQ6UXU4 331 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 DVL3Q92997 716 aaPredicted RBP16.07■□□□□ 0.16
CAPN3-209ENST00000466222 POM121L2Q96KW2 1035 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 UQCC2Q9BRT2 126 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 ARL6Q9H0F7 186 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 FXYD6Q9H0Q3 95 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 GPR84Q9NQS5 396 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 ZGRF1Q86YA3 2104 aa16.07■□□□□ 0.16
CAPN3-209ENST00000466222 ATXN7O15265 892 aaPredicted RBP16.06■□□□□ 0.16
CAPN3-209ENST00000466222 SIX6O95475 246 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 ZNF735P0CB33 412 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 ZNF250P15622 560 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 BDKRB2P30411 391 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 SPOCK1Q08629 439 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 CDSNQ15517 529 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 RGS7BPQ6MZT1 257 aaPredicted RBP16.06■□□□□ 0.16
CAPN3-209ENST00000466222 COMMD2Q86X83 199 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 AQP3Q92482 292 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 FAM71F1Q96KD3 344 aaPredicted RBP16.06■□□□□ 0.16
CAPN3-209ENST00000466222 PRRT1Q99946 306 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 OR51B6Q9H340 312 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 MOB1AQ9H8S9 216 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 PFDN2Q9UHV9 154 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 RHBDD3Q9Y3P4 386 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 NCOA6Q14686 2063 aaPredicted RBP16.06■□□□□ 0.16
CAPN3-209ENST00000466222 A0A1B0GW55 424 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 MFSD2BA6NFX1 497 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 BPNT1O95861 308 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 NGFP01138 241 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms