RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 SERINC1Q9NRX5 453 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 SOHLH2Q9NX45 425 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 ANXA10Q9UJ72 324 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 ADAMTS9Q9P2N4 1935 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 DHRS7CA6NNS2 312 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 B4DGG1 531 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 ZNF587BE7ETH6 402 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 GPR37O15354 613 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 ST8SIA3O43173 380 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 OR1D4P47884 311 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 ZNF266Q14584 549 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 ELOBQ15370 118 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 ZNF674Q2M3X9 581 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 TMEM182Q6ZP80 229 aaPredicted RBP17.3■□□□□ 0.36
SDF4-205ENST00000465727 SLC38A9Q8NBW4 561 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 CPNE4Q96A23 557 aaPredicted RBP17.3■□□□□ 0.36
SDF4-205ENST00000465727 C14orf144Q96I85 54 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 EMC6Q9BV81 110 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 CHRNA10Q9GZZ6 450 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 NELFAQ9H3P2 528 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 ZNF319Q9P2F9 582 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 IGKV1D-8A0A087WSZ0 117 aa17.29■□□□□ 0.36
SDF4-205ENST00000465727 SPTY2D1-AS1A0A0U1RR47 76 aa17.29■□□□□ 0.36
SDF4-205ENST00000465727 ADAM10O14672 748 aa17.29■□□□□ 0.36
SDF4-205ENST00000465727 PPP1R2P9O14990 202 aa17.29■□□□□ 0.36
SDF4-205ENST00000465727 OR5H8P0DN80 308 aa17.29■□□□□ 0.36
SDF4-205ENST00000465727 TAGLN2P37802 199 aaKnown RBP17.29■□□□□ 0.36
SDF4-205ENST00000465727 CLRN1P58418 232 aa17.29■□□□□ 0.36
SDF4-205ENST00000465727 GRB2P62993 217 aaKnown RBP17.29■□□□□ 0.36
SDF4-205ENST00000465727 NOXO1Q8NFA2 376 aa17.29■□□□□ 0.36
SDF4-205ENST00000465727 RAB39BQ96DA2 213 aa17.29■□□□□ 0.36
SDF4-205ENST00000465727 MVB12AQ96EY5 273 aa17.29■□□□□ 0.36
SDF4-205ENST00000465727 KIAA1456Q9P272 454 aa17.29■□□□□ 0.36
SDF4-205ENST00000465727 MCTS1Q9ULC4 181 aaKnown RBP17.29■□□□□ 0.36
SDF4-205ENST00000465727 MMP24Q9Y5R2 645 aa17.29■□□□□ 0.36
SDF4-205ENST00000465727 ARID1AO14497 2285 aa17.29■□□□□ 0.36
SDF4-205ENST00000465727 LIPT2A6NK58 231 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 ABCA11PQ4W5N1 156 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.28■□□□□ 0.36
SDF4-205ENST00000465727 HIST2H3PS2Q5TEC6 136 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 TTLL10Q6ZVT0 673 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 C1QL2Q7Z5L3 287 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 Q8WTZ3 238 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 C18orf12Q96KH6 178 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 RARRES2Q99969 163 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 NECAP2Q9NVZ3 263 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 ST8SIA5O15466 376 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 RAMP1O60894 148 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 DIRAS3O95661 229 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 IGHG1P01857 330 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 UBE2KP61086 200 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 C1orf61Q13536 156 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 UBE2V2Q15819 145 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 CRIP3Q6Q6R5 217 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 FBXW12Q6X9E4 464 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 LIAT1Q6ZQX7 453 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 SSX9Q7RTT3 188 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 OR10D4PQ8NGN7 298 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 RTN4IP1Q8WWV3 396 aaPredicted RBP17.28■□□□□ 0.36
SDF4-205ENST00000465727 PNRC2Q9NPJ4 139 aaKnown RBP17.28■□□□□ 0.36
SDF4-205ENST00000465727 PLEKHJ1Q9NW61 149 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 ZDHHC8Q9ULC8 765 aa17.28■□□□□ 0.36
SDF4-205ENST00000465727 VSTM2BA6NLU5 285 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 STMND1H3BQB6 276 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 XRCC2O43543 280 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 HIST1H2BKO60814 126 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 HIST1H2BJP06899 126 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 HEXBP07686 556 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 OR5AC1P0C628 307 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 PGA4P0DJD7 388 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 PGA3P0DJD8 388 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 ZNF728P0DKX0 622 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 ATXN8OSP0DMR3 200 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 HIST1H2BOP23527 126 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 HIST1H2BBP33778 126 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 HIST1H2BDP58876 126 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 HIST1H2BCP62807 126 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 C17orf67Q0P5P2 114 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 GNMTQ14749 295 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 KCNMB1Q16558 191 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 HIST2H2BEQ16778 126 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.27■□□□□ 0.36
SDF4-205ENST00000465727 FAM57BQ71RH2 274 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 LGI3Q8N145 548 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 ZNF283Q8N7M2 679 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 OR5D18Q8NGL1 313 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 PHOSPHO2Q8TCD6 241 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 PP6455Q8WZ26 134 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 HIST1H2BHQ93079 126 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 MARS2Q96GW9 593 aaKnown RBP17.27■□□□□ 0.36
SDF4-205ENST00000465727 HIST1H2BNQ99877 126 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 HIST1H2BMQ99879 126 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 B3GAT1Q9P2W7 334 aa17.27■□□□□ 0.36
SDF4-205ENST00000465727 ATXN7L1Q9ULK2 861 aaPredicted RBP17.27■□□□□ 0.36
SDF4-205ENST00000465727 HSD17B6O14756 317 aa17.27■□□□□ 0.35
SDF4-205ENST00000465727 TGOLN2O43493 480 aa17.27■□□□□ 0.35
SDF4-205ENST00000465727 IGLV3-1P01715 115 aa17.27■□□□□ 0.35
SDF4-205ENST00000465727 BLKP51451 505 aa17.27■□□□□ 0.35
SDF4-205ENST00000465727 PKIAP61925 76 aa17.27■□□□□ 0.35
SDF4-205ENST00000465727 NKX6-1P78426 367 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms