RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 CRHBPP24387 322 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 AZGP1P25311 298 aaKnown RBP9.71□□□□□ -0.86
CUX1-207ENST00000465461 CFHR2P36980 270 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 MAP2K4P45985 399 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 PITPNBP48739 271 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 CEBPDP49716 269 aaPredicted RBP9.71□□□□□ -0.86
CUX1-207ENST00000465461 FUT6P51993 359 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 WNT4P56705 351 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 GNB2P62879 340 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 MICBQ29980 383 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 CCDC58Q4VC31 144 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 ESCO2Q56NI9 601 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 DMKNQ6E0U4 476 aaPredicted RBP9.71□□□□□ -0.86
CUX1-207ENST00000465461 ASPHD2Q6ICH7 369 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 ZNF573Q86YE8 665 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 EGFL6Q8IUX8 553 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 FAM216BQ8N7L0 139 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 OR10Z1Q8NGY1 313 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 ZNF671Q8TAW3 534 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 SLAMF9Q96A28 289 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 C10orf35Q96D05 121 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 SMIM19Q96E16 107 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 BORCS8Q96FH0 119 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 PGLYRP3Q96LB9 341 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 TECTBQ96PL2 329 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 ZNF184Q99676 751 aaPredicted RBP9.71□□□□□ -0.86
CUX1-207ENST00000465461 BEX2Q9BXY8 128 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 CCDC90BQ9GZT6 254 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 DUSP21Q9H596 190 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 ZCCHC4Q9H5U6 513 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 SMURF1Q9HCE7 757 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 TRIM36Q9NQ86 728 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 TAS2R4Q9NYW5 299 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 ERGIC3Q9Y282 383 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 HIVEP2P31629 2446 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 MTORP42345 2549 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 TRAV20A0A0B4J274 112 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 A0A1W2PPK0 400 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 DVL1O14640 695 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 TMPRSS2O15393 492 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 SPRY1O43609 319 aaPredicted RBP9.7□□□□□ -0.86
CUX1-207ENST00000465461 RGS10O43665 173 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 RRP9O43818 475 aaKnown RBP9.7□□□□□ -0.86
CUX1-207ENST00000465461 FSTL3O95633 263 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 OCM2P0CE71 109 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 OCMP0CE72 109 aaPredicted RBP9.7□□□□□ -0.86
CUX1-207ENST00000465461 ADRA2CP18825 462 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 CELP19835 753 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 GABRA2P47869 451 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 POU3F4P49335 361 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 MTCP1P56278 107 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 RPS11P62280 158 aaKnown RBP eCLIP9.7□□□□□ -0.86
CUX1-207ENST00000465461 IKZF1Q13422 519 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 IRF3Q14653 427 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 CNN3Q15417 329 aaKnown RBP9.7□□□□□ -0.86
CUX1-207ENST00000465461 MED22Q15528 200 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 DCAF12L2Q5VW00 463 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 WDR25Q64LD2 544 aaPredicted RBP9.7□□□□□ -0.86
CUX1-207ENST00000465461 STUMQ69YW2 141 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 C1orf229Q6ZS94 237 aaPredicted RBP9.7□□□□□ -0.86
CUX1-207ENST00000465461 SLC25A26Q70HW3 274 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 UTS2BQ765I0 119 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 NLRC3Q7RTR2 1065 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 SERPINA12Q8IW75 414 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 POC1AQ8NBT0 407 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 OR51A2Q8NGJ7 313 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 OR5D18Q8NGL1 313 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 HAVCR2Q8TDQ0 301 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 GPR148Q8TDV2 347 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 PP6455Q8WZ26 134 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 TMIGD2Q96BF3 282 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 MND1Q9BWT6 205 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 CDCA4Q9BXL8 241 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 TMPRSS13Q9BYE2 586 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 SHARPINQ9H0F6 387 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 MTCH1Q9NZJ7 389 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 NLKQ9UBE8 527 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 CLN8Q9UBY8 286 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 ZNF281Q9Y2X9 895 aa9.7□□□□□ -0.86
CUX1-207ENST00000465461 LSM2Q9Y333 95 aaKnown RBP9.7□□□□□ -0.86
CUX1-207ENST00000465461 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.7□□□□□ -0.864e-10■■■■■ 26.8
CUX1-207ENST00000465461 SONP18583 2426 aaKnown RBP9.7□□□□□ -0.86
CUX1-207ENST00000465461 IGKV1D-17A0A075B6S4 117 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 LOC105371242A0A075B767 164 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 OR2AT4A6NND4 320 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 A8MXK9 166 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 C22orf46C9J442 243 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 DENRO43583 198 aaKnown RBP9.69□□□□□ -0.86
CUX1-207ENST00000465461 ANGPTL7O43827 346 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 PGA5P0DJD9 388 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 PSG2P11465 335 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 MUC1P15941 1255 aaPredicted RBP9.69□□□□□ -0.86
CUX1-207ENST00000465461 NPBWR2P48146 333 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 RBP2P50120 134 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 ATP1B3P54709 279 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 INSL4Q14641 139 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 KCNJ8Q15842 424 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 CHRFAM7AQ494W8 412 aa9.69□□□□□ -0.86
CUX1-207ENST00000465461 RBM48Q5RL73 367 aaKnown RBP9.69□□□□□ -0.86
CUX1-207ENST00000465461 CRIP3Q6Q6R5 217 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms