RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 KIAA2026Q5HYC2 2103 aa7.31□□□□□ -1.24
APP-213ENST00000464867 SDHDO14521 159 aa7.31□□□□□ -1.24
APP-213ENST00000464867 IMPA2O14732 288 aa7.31□□□□□ -1.24
APP-213ENST00000464867 HLA-DQA2P01906 255 aa7.31□□□□□ -1.24
APP-213ENST00000464867 SHBGP04278 402 aa7.31□□□□□ -1.24
APP-213ENST00000464867 GPX2P18283 190 aa7.31□□□□□ -1.24
APP-213ENST00000464867 MNDAP41218 407 aa7.31□□□□□ -1.24
APP-213ENST00000464867 GABPB1Q06547 395 aaPredicted RBP7.31□□□□□ -1.24
APP-213ENST00000464867 TAF13Q15543 124 aa7.31□□□□□ -1.24
APP-213ENST00000464867 CYP51A1Q16850 503 aa7.31□□□□□ -1.24
APP-213ENST00000464867 TIGD6Q17RP2 521 aa7.31□□□□□ -1.24
APP-213ENST00000464867 RNLSQ5VYX0 342 aa7.31□□□□□ -1.24
APP-213ENST00000464867 GPR139Q6DWJ6 353 aa7.31□□□□□ -1.24
APP-213ENST00000464867 SLC35E3Q7Z769 313 aa7.31□□□□□ -1.24
APP-213ENST00000464867 IFT20Q8IY31 132 aa7.31□□□□□ -1.24
APP-213ENST00000464867 STPG2Q8N412 459 aa7.31□□□□□ -1.24
APP-213ENST00000464867 ZNF676Q8N7Q3 588 aa7.31□□□□□ -1.24
APP-213ENST00000464867 CSNK2A3Q8NEV1 391 aa7.31□□□□□ -1.24
APP-213ENST00000464867 ZNF671Q8TAW3 534 aa7.31□□□□□ -1.24
APP-213ENST00000464867 C4orf3Q8WVX3 66 aa7.31□□□□□ -1.24
APP-213ENST00000464867 HIST1H2AAQ96QV6 131 aa7.31□□□□□ -1.24
APP-213ENST00000464867 CLEC7AQ9BXN2 247 aa7.31□□□□□ -1.24
APP-213ENST00000464867 ABCB9Q9NP78 766 aa7.31□□□□□ -1.24
APP-213ENST00000464867 SDR39U1Q9NRG7 319 aaPredicted RBP7.31□□□□□ -1.24
APP-213ENST00000464867 DPM3Q9P2X0 92 aa7.31□□□□□ -1.24
APP-213ENST00000464867 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.31□□□□□ -1.24
APP-213ENST00000464867 ZNF222Q9UK12 451 aa7.31□□□□□ -1.24
APP-213ENST00000464867 IGHV2-26A0A0B4J1V2 119 aa7.3□□□□□ -1.24
APP-213ENST00000464867 OR6C68A6NDL8 312 aa7.3□□□□□ -1.24
APP-213ENST00000464867 RFPL4AA6NLU0 287 aa7.3□□□□□ -1.24
APP-213ENST00000464867 LEUTXA8MZ59 168 aa7.3□□□□□ -1.24
APP-213ENST00000464867 RFPL4AL1F8VTS6 287 aa7.3□□□□□ -1.24
APP-213ENST00000464867 SOCS2O14508 198 aa7.3□□□□□ -1.24
APP-213ENST00000464867 OVOL1O14753 267 aa7.3□□□□□ -1.24
APP-213ENST00000464867 TBX1O43435 398 aa7.3□□□□□ -1.24
APP-213ENST00000464867 TROVE2P10155 538 aaKnown RBP eCLIP7.3□□□□□ -1.24
APP-213ENST00000464867 CFL1P23528 166 aaKnown RBP7.3□□□□□ -1.24
APP-213ENST00000464867 CEACAM3P40198 252 aa7.3□□□□□ -1.24
APP-213ENST00000464867 ST3GAL3Q11203 375 aa7.3□□□□□ -1.24
APP-213ENST00000464867 GPR50Q13585 617 aa7.3□□□□□ -1.24
APP-213ENST00000464867 FHL3Q13643 280 aa7.3□□□□□ -1.24
APP-213ENST00000464867 SLC16A9Q7RTY1 509 aa7.3□□□□□ -1.24
APP-213ENST00000464867 FAM71E2Q8N5Q1 922 aa7.3□□□□□ -1.24
APP-213ENST00000464867 OR9I1Q8NGQ6 314 aa7.3□□□□□ -1.24
APP-213ENST00000464867 OR1N2Q8NGR9 330 aa7.3□□□□□ -1.24
APP-213ENST00000464867 OR13C2Q8NGS9 318 aa7.3□□□□□ -1.24
APP-213ENST00000464867 UBLCP1Q8WVY7 318 aaPredicted RBP7.3□□□□□ -1.24
APP-213ENST00000464867 RNF170Q96K19 258 aa7.3□□□□□ -1.24
APP-213ENST00000464867 TUBA4BQ9H853 241 aa7.3□□□□□ -1.24
APP-213ENST00000464867 SP140LQ9H930 580 aa7.3□□□□□ -1.24
APP-213ENST00000464867 PNPOQ9NVS9 261 aa7.3□□□□□ -1.24
APP-213ENST00000464867 RASL12Q9NYN1 266 aa7.3□□□□□ -1.24
APP-213ENST00000464867 CYB5R1Q9UHQ9 305 aa7.3□□□□□ -1.24
APP-213ENST00000464867 MPC1Q9Y5U8 109 aa7.3□□□□□ -1.24
APP-213ENST00000464867 ABCA13Q86UQ4 5058 aa7.3□□□□□ -1.24
APP-213ENST00000464867 KMT2AQ03164 3969 aa7.3□□□□□ -1.24
APP-213ENST00000464867 CXorf65A6NEN9 183 aa7.29□□□□□ -1.24
APP-213ENST00000464867 NUPR2A6NF83 97 aa7.29□□□□□ -1.24
APP-213ENST00000464867 UBDO15205 165 aa7.29□□□□□ -1.24
APP-213ENST00000464867 SERPINA1P01009 418 aa7.29□□□□□ -1.24
APP-213ENST00000464867 ELANEP08246 267 aa7.29□□□□□ -1.24
APP-213ENST00000464867 ARSBP15848 533 aa7.29□□□□□ -1.24
APP-213ENST00000464867 ZNF823P16415 610 aa7.29□□□□□ -1.24
APP-213ENST00000464867 HOXB9P17482 250 aaPredicted RBP7.29□□□□□ -1.24
APP-213ENST00000464867 PRDX2P32119 198 aa7.29□□□□□ -1.24
APP-213ENST00000464867 DLX6P56179 175 aa7.29□□□□□ -1.24
APP-213ENST00000464867 FAM3AP98173 230 aa7.29□□□□□ -1.24
APP-213ENST00000464867 FOXE3Q13461 319 aa7.29□□□□□ -1.24
APP-213ENST00000464867 NFYCQ13952 458 aa7.29□□□□□ -1.24
APP-213ENST00000464867 SMIM21Q3B7S5 101 aa7.29□□□□□ -1.24
APP-213ENST00000464867 ZBED5Q49AG3 693 aa7.29□□□□□ -1.24
APP-213ENST00000464867 CCDC144NLQ6NUI1 221 aa7.29□□□□□ -1.24
APP-213ENST00000464867 ACP7Q6ZNF0 438 aa7.29□□□□□ -1.24
APP-213ENST00000464867 FAM122BQ7Z309 247 aa7.29□□□□□ -1.24
APP-213ENST00000464867 NRMQ8IXM6 262 aa7.29□□□□□ -1.24
APP-213ENST00000464867 FAM156AQ8NDB6 213 aa7.29□□□□□ -1.24
APP-213ENST00000464867 BVESQ8NE79 360 aa7.29□□□□□ -1.24
APP-213ENST00000464867 ZNF596Q8TC21 504 aa7.29□□□□□ -1.24
APP-213ENST00000464867 SPSB4Q96A44 273 aa7.29□□□□□ -1.24
APP-213ENST00000464867 CREB3L1Q96BA8 519 aa7.29□□□□□ -1.24
APP-213ENST00000464867 PKNOX2Q96KN3 472 aa7.29□□□□□ -1.24
APP-213ENST00000464867 ZNF714Q96N38 554 aa7.29□□□□□ -1.24
APP-213ENST00000464867 SORT1Q99523 831 aa7.29□□□□□ -1.24
APP-213ENST00000464867 COPS4Q9BT78 406 aa7.29□□□□□ -1.24
APP-213ENST00000464867 C20orf27Q9GZN8 174 aa7.29□□□□□ -1.24
APP-213ENST00000464867 RABEP2Q9H5N1 569 aa7.29□□□□□ -1.24
APP-213ENST00000464867 PPP1R3EQ9H7J1 279 aa7.29□□□□□ -1.24
APP-213ENST00000464867 PNRC2Q9NPJ4 139 aaKnown RBP7.29□□□□□ -1.24
APP-213ENST00000464867 VAPAQ9P0L0 249 aa7.29□□□□□ -1.24
APP-213ENST00000464867 PFDN2Q9UHV9 154 aa7.29□□□□□ -1.24
APP-213ENST00000464867 BAG5Q9UL15 447 aa7.29□□□□□ -1.24
APP-213ENST00000464867 PYCARDQ9ULZ3 195 aa7.29□□□□□ -1.24
APP-213ENST00000464867 RHBDD3Q9Y3P4 386 aa7.29□□□□□ -1.24
APP-213ENST00000464867 GMEB1Q9Y692 573 aa7.29□□□□□ -1.24
APP-213ENST00000464867 SESN1Q9Y6P5 492 aa7.29□□□□□ -1.24
APP-213ENST00000464867 DSCAML1Q8TD84 2053 aa7.28□□□□□ -1.24
APP-213ENST00000464867 AP4M1O00189 453 aa7.28□□□□□ -1.24
APP-213ENST00000464867 BIRC5O15392 142 aa7.28□□□□□ -1.24
APP-213ENST00000464867 MTRF1O75570 445 aaKnown RBP7.28□□□□□ -1.24
APP-213ENST00000464867 DEDDO75618 318 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms