RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 LOXHD1Q8IVV2 1947 aa2.2□□□□□ -2.06
CLK1-208ENST00000464454 IGKV1-6A0A0C4DH72 117 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 FAM240AA0A1B0GVK7 77 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 TMEM72A0PK05 275 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 C16orf90A8MZG2 172 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 RFXANKO14593 260 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 PRMT5O14744 637 aaPredicted RBP2.19□□□□□ -2.06
CLK1-208ENST00000464454 IGKV1-39P01597 117 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 IGKV1D-39P04432 117 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 CCDC172P0C7W6 258 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 RGS6P49758 472 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 GDI2P50395 445 aaKnown RBP2.19□□□□□ -2.06
CLK1-208ENST00000464454 TOMM34Q15785 309 aaPredicted RBP2.19□□□□□ -2.06
CLK1-208ENST00000464454 TAL2Q16559 108 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 NDUFAF6Q330K2 333 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 C6orf183Q5T699 404 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 KPRPQ5T749 579 aaPredicted RBP2.19□□□□□ -2.06
CLK1-208ENST00000464454 C16orf47Q6ZP98 133 aaPredicted RBP2.19□□□□□ -2.06
CLK1-208ENST00000464454 CA13Q8N1Q1 262 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 SLC26A10Q8NG04 563 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 ORAOV1Q8WV07 137 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 TMED9Q9BVK6 235 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 API5Q9BZZ5 524 aaKnown RBP2.19□□□□□ -2.06
CLK1-208ENST00000464454 COA1Q9GZY4 146 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 LINC00574Q9H8X3 128 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 ANKHQ9HCJ1 492 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 CA10Q9NS85 328 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 HMGXB4Q9UGU5 601 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 RWDD2AQ9UIY3 292 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 AP3M1Q9Y2T2 418 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 ORC6Q9Y5N6 252 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 ADGRL1O94910 1474 aa2.19□□□□□ -2.06
CLK1-208ENST00000464454 TRAV8-7A0A075B6U6 113 aa2.18□□□□□ -2.06
CLK1-208ENST00000464454 E7EWF7 191 aa2.18□□□□□ -2.06
CLK1-208ENST00000464454 OR4Q2P0C623 313 aa2.18□□□□□ -2.06
CLK1-208ENST00000464454 HLA-GP17693 338 aa2.18□□□□□ -2.06
CLK1-208ENST00000464454 CD9P21926 228 aa2.18□□□□□ -2.06
CLK1-208ENST00000464454 RBX1P62877 108 aa2.18□□□□□ -2.06
CLK1-208ENST00000464454 VAMP3Q15836 100 aa2.18□□□□□ -2.06
CLK1-208ENST00000464454 SP6Q3SY56 376 aa2.18□□□□□ -2.06
CLK1-208ENST00000464454 SYT6Q5T7P8 510 aaPredicted RBP2.18□□□□□ -2.06
CLK1-208ENST00000464454 PDPNQ86YL7 162 aa2.18□□□□□ -2.06
CLK1-208ENST00000464454 NT5CQ8TCD5 201 aa2.18□□□□□ -2.06
CLK1-208ENST00000464454 C20orf144Q9BQM9 153 aa2.18□□□□□ -2.06
CLK1-208ENST00000464454 MS4A8Q9BY19 250 aa2.18□□□□□ -2.06
CLK1-208ENST00000464454 SYT4Q9H2B2 425 aa2.18□□□□□ -2.06
CLK1-208ENST00000464454 WDR55Q9H6Y2 383 aaPredicted RBP2.18□□□□□ -2.06
CLK1-208ENST00000464454 STX18Q9P2W9 335 aaKnown RBP2.18□□□□□ -2.06
CLK1-208ENST00000464454 PRO0628Q9UI54 55 aa2.18□□□□□ -2.06
CLK1-208ENST00000464454 ACOT9Q9Y305 439 aa2.18□□□□□ -2.06
CLK1-208ENST00000464454 TMEM131Q92545 1883 aa2.18□□□□□ -2.06
CLK1-208ENST00000464454 M0R1B8 84 aa2.17□□□□□ -2.06
CLK1-208ENST00000464454 ZNF593O00488 134 aaPredicted RBP2.17□□□□□ -2.06
CLK1-208ENST00000464454 TCAPO15273 167 aa2.17□□□□□ -2.06
CLK1-208ENST00000464454 CNMDO75829 334 aa2.17□□□□□ -2.06
CLK1-208ENST00000464454 IGLV7-43P04211 117 aa2.17□□□□□ -2.06
CLK1-208ENST00000464454 LIPCP11150 499 aa2.17□□□□□ -2.06
CLK1-208ENST00000464454 DEKP35659 375 aaKnown RBP2.17□□□□□ -2.06
CLK1-208ENST00000464454 P2RY2P41231 377 aa2.17□□□□□ -2.06
CLK1-208ENST00000464454 IL5RAQ01344 420 aa2.17□□□□□ -2.06
CLK1-208ENST00000464454 ATP5G2Q06055 141 aa2.17□□□□□ -2.06
CLK1-208ENST00000464454 DYNC1I2Q13409 638 aaKnown RBP2.17□□□□□ -2.06
CLK1-208ENST00000464454 PID1Q7Z2X4 250 aa2.17□□□□□ -2.06
CLK1-208ENST00000464454 SETD3Q86TU7 594 aaPredicted RBP2.17□□□□□ -2.06
CLK1-208ENST00000464454 OR6K2Q8NGY2 324 aa2.17□□□□□ -2.06
CLK1-208ENST00000464454 ZNF420Q8TAQ5 688 aaPredicted RBP2.17□□□□□ -2.06
CLK1-208ENST00000464454 ZNF75CPQ92670 426 aaPredicted RBP2.17□□□□□ -2.06
CLK1-208ENST00000464454 YIPF6Q96EC8 236 aa2.17□□□□□ -2.06
CLK1-208ENST00000464454 SMIM8Q96KF7 97 aa2.17□□□□□ -2.06
CLK1-208ENST00000464454 OR2M4Q96R27 311 aa2.17□□□□□ -2.06
CLK1-208ENST00000464454 METTL26Q96S19 204 aa2.17□□□□□ -2.06
CLK1-208ENST00000464454 UTP23Q9BRU9 249 aaKnown RBP2.17□□□□□ -2.06
CLK1-208ENST00000464454 MRPL20Q9BYC9 149 aaKnown RBP2.17□□□□□ -2.06
CLK1-208ENST00000464454 DHX35Q9H5Z1 703 aaKnown RBP2.17□□□□□ -2.06
CLK1-208ENST00000464454 VAPAQ9P0L0 249 aa2.17□□□□□ -2.06
CLK1-208ENST00000464454 DHCR7Q9UBM7 475 aaKnown RBP2.17□□□□□ -2.06
CLK1-208ENST00000464454 ELP1O95163 1332 aa2.17□□□□□ -2.06
CLK1-208ENST00000464454 THADAQ6YHU6 1953 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 TVP23AA6NH52 213 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 OR6C70A6NIJ9 312 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 RNASE2P10153 161 aaKnown RBP2.16□□□□□ -2.06
CLK1-208ENST00000464454 BGNP21810 368 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 HLA-DMAP28067 261 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 GPR4P46093 362 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 TGM4P49221 684 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 RPL10AP62906 217 aaKnown RBP2.16□□□□□ -2.06
CLK1-208ENST00000464454 FLI1Q01543 452 aaPredicted RBP2.16□□□□□ -2.06
CLK1-208ENST00000464454 PMVKQ15126 192 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 ZNF678Q5SXM1 525 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 IDNKQ5T6J7 187 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 FAM104BQ5XKR9 115 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 TBPL2Q6SJ96 375 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 NT5DC3Q86UY8 548 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 SGPP2Q8IWX5 399 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 NELFCDQ8IXH7 590 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 SYS1Q8N2H4 156 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 OR4K2Q8NGD2 314 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 OR1P1Q8NH06 330 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 RILPQ96NA2 401 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 DERL3Q96Q80 235 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms