RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 GMFBP60983 142 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 RPS11P62280 158 aaKnown RBP eCLIP14.23□□□□□ -0.13
VPS52-215ENST00000464425 CEACAM21Q3KPI0 293 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 ESCO2Q56NI9 601 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 PLCXD3Q63HM9 321 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 MS4A15Q8N5U1 240 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 PARP16Q8N5Y8 322 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 SCCPDHQ8NBX0 429 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 OR4M2Q8NGB6 313 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 RGP1Q92546 391 aaPredicted RBP14.23□□□□□ -0.13
VPS52-215ENST00000464425 UFD1Q92890 307 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 TECTBQ96PL2 329 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 TLNRD1Q9H1K6 362 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 MMP26Q9NRE1 261 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 GPR173Q9NS66 373 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 DHDHQ9UQ10 334 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 TRAV38-1A0A0B4J264 116 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 TRBV5-5A0A0J9YX44 114 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 TMEM210A6NLX4 147 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 KIAA1324LA8MWY0 1029 aaPredicted RBP14.22□□□□□ -0.13
VPS52-215ENST00000464425 TRAPPC2LH3BP13 241 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 GYPAP02724 150 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 GNG3P63215 75 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 FAM76BQ5HYJ3 339 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 DCAF12L2Q5VW00 463 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 DCDC5Q6ZRR9 648 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 UTS2BQ765I0 119 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 NLRC3Q7RTR2 1065 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 SERPINA12Q8IW75 414 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 OR8B3Q8NGG8 313 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 OR5A2Q8NGI9 324 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 FGGYQ96C11 551 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 SEH1LQ96EE3 360 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 ADAT3Q96EY9 351 aaPredicted RBP14.22□□□□□ -0.13
VPS52-215ENST00000464425 NEIL1Q96FI4 390 aaPredicted RBP14.22□□□□□ -0.13
VPS52-215ENST00000464425 OPALINQ96PE5 141 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 OR8B2Q96RD0 313 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 SSBP3Q9BWW4 388 aaPredicted RBP14.22□□□□□ -0.13
VPS52-215ENST00000464425 CHST5Q9GZS9 411 aa14.22□□□□□ -0.13
VPS52-215ENST00000464425 PNMA8CA0A1B0GUJ8 204 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 ANKRD61A6NGH8 418 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 TRIM64CA6NLI5 447 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 GATBO75879 557 aaKnown RBP14.21□□□□□ -0.13
VPS52-215ENST00000464425 ALX3O95076 343 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 AVPP01185 164 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 CD2P06729 351 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 OCM2P0CE71 109 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 ZNF20P17024 532 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 PITPNBP48739 271 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 GNB2P62879 340 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 TRAM1Q15629 374 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 KCNJ8Q15842 424 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 Q499Y3 187 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 ARMCX4Q5H9R4 360 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 LIPKQ5VXJ0 399 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 PHC2Q8IXK0 858 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 OR5D14Q8NGL3 314 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 TSEN15Q8WW01 171 aaKnown RBP14.21□□□□□ -0.13
VPS52-215ENST00000464425 THRSPQ92748 146 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 TMPRSS13Q9BYE2 586 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 OR51I2Q9H344 312 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 C7orf69Q9H7B7 122 aa14.21□□□□□ -0.13
VPS52-215ENST00000464425 LOC105371242A0A075B767 164 aa14.2□□□□□ -0.14
VPS52-215ENST00000464425 OR5B21A6NL26 309 aa14.2□□□□□ -0.14
VPS52-215ENST00000464425 ADAM20O43506 726 aa14.2□□□□□ -0.14
VPS52-215ENST00000464425 RHBDL1O75783 438 aa14.2□□□□□ -0.14
VPS52-215ENST00000464425 IFNA2P01563 188 aa14.2□□□□□ -0.14
VPS52-215ENST00000464425 PSMA1P25786 263 aaKnown RBP14.2□□□□□ -0.14
VPS52-215ENST00000464425 UBE2V2Q15819 145 aa14.2□□□□□ -0.14
VPS52-215ENST00000464425 SYT6Q5T7P8 510 aaPredicted RBP14.2□□□□□ -0.14
VPS52-215ENST00000464425 C1orf229Q6ZS94 237 aaPredicted RBP14.2□□□□□ -0.14
VPS52-215ENST00000464425 FAM90A1Q86YD7 464 aa14.2□□□□□ -0.14
VPS52-215ENST00000464425 OR5V1Q9UGF6 321 aa14.2□□□□□ -0.14
VPS52-215ENST00000464425 A8MXK9 166 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.19□□□□□ -0.14
VPS52-215ENST00000464425 TNFRSF13BO14836 293 aaPredicted RBP14.19□□□□□ -0.14
VPS52-215ENST00000464425 AKR7A2O43488 359 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 INMTO95050 263 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 ADRA2CP18825 462 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 CPT2P23786 658 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 CFHR2P36980 270 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 MICBQ29980 383 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 KRTAP21-3Q3LHN1 58 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 TEX36Q5VZQ5 186 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 HAGHLQ6PII5 290 aaPredicted RBP14.19□□□□□ -0.14
VPS52-215ENST00000464425 UNQ9370/PRO34162Q6UXP9 181 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 ZNF841Q6ZN19 808 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 OR5T2Q8NGG2 359 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 OR10Z1Q8NGY1 313 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 TMEM106AQ96A25 262 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 WDR13Q9H1Z4 485 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 ZCCHC4Q9H5U6 513 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 VCX3AQ9NNX9 186 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 SNTG1Q9NSN8 517 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 CTSZQ9UBR2 303 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 CLN8Q9UBY8 286 aa14.19□□□□□ -0.14
VPS52-215ENST00000464425 POLR3KQ9Y2Y1 108 aaPredicted RBP14.19□□□□□ -0.14
VPS52-215ENST00000464425 SF3B6Q9Y3B4 125 aaKnown RBP14.19□□□□□ -0.14
VPS52-215ENST00000464425 TRBV5-7A0A0A0MS05 114 aa14.18□□□□□ -0.14
VPS52-215ENST00000464425 PPIAL4CA0A0B4J2A2 164 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms