RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 WBP1LQ9NX94 342 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 GFOD1Q9NXC2 390 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 INTS1Q8N201 2190 aaKnown RBP8.05□□□□□ -1.12
HPS4-208ENST00000464362 E5RGE8 158 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 PPP1R2P9O14990 202 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 DEGS1O15121 323 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 CLN3Q13286 438 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 LAMTOR1Q6IAA8 161 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 RABEPKQ7Z6M1 372 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 RGP1Q92546 391 aaPredicted RBP8.05□□□□□ -1.12
HPS4-208ENST00000464362 TTC9Q92623 222 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 TM4SF19Q96DZ7 209 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 NSG2Q9Y328 171 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 TIMM10BQ9Y5J6 103 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 PHF3Q92576 2039 aaKnown RBP8.05□□□□□ -1.12
HPS4-208ENST00000464362 CDC14BO60729 498 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 UPK3AO75631 287 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 CRHP06850 196 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 OR5AC1P0C628 307 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 GPM6AP51674 278 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 PJVKQ0ZLH3 352 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 Q3ZCU0 254 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 MRGPREQ86SM8 312 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 OSR2Q8N2R0 312 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 GPX8Q8TED1 209 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 RSRP1Q9BUV0 290 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 PLA2G3Q9NZ20 509 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 PCOLCE2Q9UKZ9 415 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 RCL1Q9Y2P8 373 aaKnown RBP8.05□□□□□ -1.12
HPS4-208ENST00000464362 TRAV39A0A0B4J263 110 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 FAM24AA6NFZ4 105 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 ACTL6BO94805 426 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 FABP1P07148 127 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 ICAM2P13598 275 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 TBPP20226 339 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 AADACP22760 399 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 ZNF239Q16600 458 aaKnown RBP8.04□□□□□ -1.12
HPS4-208ENST00000464362 GGNBP1Q5YKI7 109 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 TMEM65Q6PI78 240 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 CXorf67Q86X51 503 aaPredicted RBP8.04□□□□□ -1.12
HPS4-208ENST00000464362 OR8U1Q8NH10 309 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 INTS12Q96CB8 462 aaKnown RBP8.04□□□□□ -1.12
HPS4-208ENST00000464362 WDR13Q9H1Z4 485 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 VSIG4Q9Y279 399 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 KCNK7Q9Y2U2 307 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 HDGFL3Q9Y3E1 203 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 FER1L5A0AVI2 2057 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 ZNF98A6NK75 572 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 MASP2O00187 686 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 GPR37O15354 613 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 TIMM8AO60220 97 aaPredicted RBP8.04□□□□□ -1.12
HPS4-208ENST00000464362 HNF1AP20823 631 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 BMP5P22003 454 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 GALNSP34059 522 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 TMEM33P57088 247 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 GUK1Q16774 197 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 C1orf53Q5VUE5 145 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 SLC16A13Q7RTY0 426 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 ANKRD37Q7Z713 158 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 ARHGEF39Q8N4T4 335 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 ZDHHC22Q8N966 263 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 DEFB108BQ8NET1 73 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 ABHD5Q8WTS1 349 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 FOXB1Q99853 325 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 HEYLQ9NQ87 328 aaPredicted RBP8.04□□□□□ -1.12
HPS4-208ENST00000464362 KLK13Q9UKR3 277 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 DOCK9Q9BZ29 2069 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 ABCA4P78363 2273 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 PLSCR5A0PG75 271 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 FAM74A7A6NL05 159 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 SERPINE3A8MV23 424 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 CDRT15L2A8MXV6 281 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 ZNF732B4DXR9 585 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 SFT2D2O95562 160 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 BGLAPP02818 100 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 HBG1P69891 147 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 HBG2P69892 147 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 SSBP1Q04837 148 aaKnown RBP8.04□□□□□ -1.12
HPS4-208ENST00000464362 COTL1Q14019 142 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 HLA-BQ31612 363 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 FAM74A3Q4VXF1 159 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 CATSPERDQ86XM0 798 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 HGDQ93099 445 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 FBXO17Q96EF6 278 aa8.04□□□□□ -1.12
HPS4-208ENST00000464362 PATZ1Q9HBE1 687 aaKnown RBP8.04□□□□□ -1.12
HPS4-208ENST00000464362 OR2M5A3KFT3 312 aa8.03□□□□□ -1.12
HPS4-208ENST00000464362 TUBAL3A6NHL2 446 aa8.03□□□□□ -1.12
HPS4-208ENST00000464362 POU2F2P09086 479 aa8.03□□□□□ -1.12
HPS4-208ENST00000464362 RCC1P18754 421 aaPredicted RBP8.03□□□□□ -1.12
HPS4-208ENST00000464362 PTGER4P35408 488 aa8.03□□□□□ -1.12
HPS4-208ENST00000464362 MSMO1Q15800 293 aa8.03□□□□□ -1.12
HPS4-208ENST00000464362 EXT1Q16394 746 aa8.03□□□□□ -1.12
HPS4-208ENST00000464362 EXTL1Q92935 676 aa8.03□□□□□ -1.12
HPS4-208ENST00000464362 USB1Q9BQ65 265 aaKnown RBP8.03□□□□□ -1.12
HPS4-208ENST00000464362 TMEM218A2RU14 115 aa8.03□□□□□ -1.12
HPS4-208ENST00000464362 MBP02144 154 aa8.03□□□□□ -1.12
HPS4-208ENST00000464362 ASAH2BP0C7U1 165 aa8.03□□□□□ -1.12
HPS4-208ENST00000464362 CCL4P13236 92 aa8.03□□□□□ -1.12
HPS4-208ENST00000464362 FCARP24071 287 aa8.03□□□□□ -1.12
HPS4-208ENST00000464362 FPR2P25090 351 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms