RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 PNLIPRP3Q17RR3 467 aa11.04□□□□□ -0.64
VAPB-203ENST00000463370 ASCL4Q6XD76 172 aa11.04□□□□□ -0.64
VAPB-203ENST00000463370 SPICQ8N5J4 248 aa11.04□□□□□ -0.64
VAPB-203ENST00000463370 WBP1Q96G27 269 aa11.04□□□□□ -0.64
VAPB-203ENST00000463370 OCSTAMPQ9BR26 566 aa11.04□□□□□ -0.64
VAPB-203ENST00000463370 FIGNL2A6NMB9 653 aa11.04□□□□□ -0.64
VAPB-203ENST00000463370 GEMIN2O14893 280 aaKnown RBP11.04□□□□□ -0.64
VAPB-203ENST00000463370 GSTT2P0CG29 244 aa11.04□□□□□ -0.64
VAPB-203ENST00000463370 NPBWR2P48146 333 aa11.04□□□□□ -0.64
VAPB-203ENST00000463370 PLP2Q04941 152 aa11.04□□□□□ -0.64
VAPB-203ENST00000463370 DAZAP2Q15038 168 aaPredicted RBP11.04□□□□□ -0.64
VAPB-203ENST00000463370 SPATA46Q5T0L3 261 aa11.04□□□□□ -0.64
VAPB-203ENST00000463370 DCAF12L2Q5VW00 463 aa11.04□□□□□ -0.64
VAPB-203ENST00000463370 MRPL21Q7Z2W9 205 aaKnown RBP11.04□□□□□ -0.64
VAPB-203ENST00000463370 ZADH2Q8N4Q0 377 aa11.04□□□□□ -0.64
VAPB-203ENST00000463370 ZNF431Q8TF32 576 aaPredicted RBP11.04□□□□□ -0.64
VAPB-203ENST00000463370 DYRK2Q92630 601 aa11.04□□□□□ -0.64
VAPB-203ENST00000463370 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.04□□□□□ -0.64
VAPB-203ENST00000463370 SLC7A11Q9UPY5 501 aa11.04□□□□□ -0.64
VAPB-203ENST00000463370 CSTBP04080 98 aaKnown RBP11.03□□□□□ -0.64
VAPB-203ENST00000463370 DNASE1P24855 282 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 MPZP25189 248 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 ATP1B3P54709 279 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 PRDX4Q13162 271 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 ZNF611Q8N823 705 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 ADAD2Q8NCV1 583 aaKnown RBP11.03□□□□□ -0.64
VAPB-203ENST00000463370 SLC30A7Q8NEW0 376 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 OR51F2Q8NH61 342 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 HS3ST6Q96QI5 342 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 PRRT1Q99946 306 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 FAAP24Q9BTP7 215 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 ALX4Q9H161 411 aaPredicted RBP11.03□□□□□ -0.64
VAPB-203ENST00000463370 RANBP3Q9H6Z4 567 aaPredicted RBP11.03□□□□□ -0.64
VAPB-203ENST00000463370 EIF3KQ9UBQ5 218 aaKnown RBP11.03□□□□□ -0.64
VAPB-203ENST00000463370 DKK4Q9UBT3 224 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 PLEKHA6Q9Y2H5 1048 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 MED12LQ86YW9 2145 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 SDCBPO00560 298 aaPredicted RBP11.03□□□□□ -0.64
VAPB-203ENST00000463370 SERPINA5P05154 406 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 APLNRP35414 380 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 GPM6AP51674 278 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 SNU13P55769 128 aaKnown RBP11.03□□□□□ -0.64
VAPB-203ENST00000463370 DHRS2Q13268 280 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 FAM189A2Q15884 450 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 ACSF3Q4G176 576 aaPredicted RBP11.03□□□□□ -0.64
VAPB-203ENST00000463370 SLC25A26Q70HW3 274 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 FBXL14Q8N1E6 418 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 OR2AK2Q8NG84 335 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 PLEKHJ1Q9NW61 149 aa11.03□□□□□ -0.64
VAPB-203ENST00000463370 PQLC2LA1A4F0 135 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 UBE2QL1A1L167 161 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 C3orf80F5H4A9 247 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 F8VVB4 439 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 F8VWA3 439 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 GOSR2O14653 212 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 ZNF780AO75290 641 aaPredicted RBP11.02□□□□□ -0.65
VAPB-203ENST00000463370 ZNF14P17017 642 aaPredicted RBP11.02□□□□□ -0.65
VAPB-203ENST00000463370 MALLQ13021 153 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 ZNF585AQ6P3V2 769 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 IGFL3Q6UXB1 125 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 HOGA1Q86XE5 327 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 MARCH1Q8TCQ1 289 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 SARAFQ96BY9 339 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 ARHGAP21Q5T5U3 1957 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 CD300LBA8K4G0 201 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 SERPINE3A8MV23 424 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 PROB1E7EW31 1015 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 OR2A4O95047 310 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 IFNA6P05013 189 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 AMY2BP19961 511 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 IL32P24001 234 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 LGALSLQ3ZCW2 172 aaPredicted RBP11.02□□□□□ -0.65
VAPB-203ENST00000463370 ZBTB37Q5TC79 503 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 RPUSD3Q6P087 351 aaKnown RBP11.02□□□□□ -0.65
VAPB-203ENST00000463370 Q6ZT83 130 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 SEM1Q6ZVN7 128 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 RBMXL3Q8N7X1 1067 aaKnown RBP11.02□□□□□ -0.65
VAPB-203ENST00000463370 OR10AD1Q8NGE0 317 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 EMG1Q92979 244 aaKnown RBP11.02□□□□□ -0.65
VAPB-203ENST00000463370 OR2A7Q96R45 310 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 SULT4A1Q9BR01 284 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 C1QTNF6Q9BXI9 259 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 GLRX2Q9NS18 164 aa11.02□□□□□ -0.65
VAPB-203ENST00000463370 ZNF701Q9NV72 531 aaPredicted RBP11.02□□□□□ -0.65
VAPB-203ENST00000463370 ZNF35P13682 527 aa11.01□□□□□ -0.65
VAPB-203ENST00000463370 TBPP20226 339 aa11.01□□□□□ -0.65
VAPB-203ENST00000463370 CHATP28329 748 aa11.01□□□□□ -0.65
VAPB-203ENST00000463370 SSTR2P30874 369 aa11.01□□□□□ -0.65
VAPB-203ENST00000463370 HAAOP46952 286 aa11.01□□□□□ -0.65
VAPB-203ENST00000463370 NPY4RP50391 375 aa11.01□□□□□ -0.65
VAPB-203ENST00000463370 IDH3GP51553 393 aaPredicted RBP11.01□□□□□ -0.65
VAPB-203ENST00000463370 ERVS71-1P61550 626 aa11.01□□□□□ -0.65
VAPB-203ENST00000463370 FOXC1Q12948 553 aa11.01□□□□□ -0.65
VAPB-203ENST00000463370 PPP1R1AQ13522 171 aa11.01□□□□□ -0.65
VAPB-203ENST00000463370 GABRA6Q16445 453 aa11.01□□□□□ -0.65
VAPB-203ENST00000463370 VAX1Q5SQQ9 334 aa11.01□□□□□ -0.65
VAPB-203ENST00000463370 Q6ZS92 163 aa11.01□□□□□ -0.65
VAPB-203ENST00000463370 OSR2Q8N2R0 312 aa11.01□□□□□ -0.65
VAPB-203ENST00000463370 PXT1Q8NFP0 134 aa11.01□□□□□ -0.65
VAPB-203ENST00000463370 OR13G1Q8NGZ3 307 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms