RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 ZDHHC23Q8IYP9 409 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 LINC00528Q8N1L1 170 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 SVOPQ8N4V2 548 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 PACRGLQ8N7B6 248 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR52I1Q8NGK6 324 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 LRRC29Q8WV35 223 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 PIGCQ92535 297 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 RPL3LQ92901 407 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 ITFG2Q969R8 447 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 SEH1LQ96EE3 360 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 MICU1Q9BPX6 476 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 PCGF1Q9BSM1 259 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 RTL8AQ9BWD3 113 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 SIRPDQ9H106 197 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 SMURF1Q9HCE7 757 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 AMBNQ9NP70 447 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 ABCB9Q9NP78 766 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 MRPS18AQ9NVS2 196 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 C14orf119Q9NWQ9 140 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 DUX4Q9UBX2 424 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 NKX1-2Q9UD57 310 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 GNG8Q9UK08 70 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 GTF2A1LQ9UNN4 478 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 PIGLQ9Y2B2 252 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 MYRFQ9Y2G1 1151 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 POMT1Q9Y6A1 747 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 KIAA2026Q5HYC2 2103 aa6.53□□□□□ -1.36
CDC42BPA-210ENST00000462553 IGHV3OR15-7A0A075B7D8 119 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 LOC107986453A0A1B0GWG9 222 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 hCG_1807616A0A1W2PRN6 198 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 ANXA2P2A6NMY6 339 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 DHRS7CA6NNS2 312 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 ZNF879B4DU55 563 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 H3BSH0 61 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 M0QZ24 198 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 CDIPTO14735 213 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 GPR137BO60478 399 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 MPZL2O60487 215 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 IGHV4-59P01825 116 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 GYPAP02724 150 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 AMY2BP19961 511 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 GPM6AP51674 278 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 OR12D2P58182 307 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 NANOS3P60323 173 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 RPL15P61313 204 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 MZT1Q08AG7 82 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 RIPPLY1Q0D2K3 151 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 ODF4Q2M2E3 257 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 C4orf48Q5BLP8 95 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 PLCXD3Q63HM9 321 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 STUMQ69YW2 141 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 LAIR2Q6ISS4 152 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 FDX2Q6P4F2 183 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 COMMD2Q86X83 199 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 LDLRAD3Q86YD5 345 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 FGFRL1Q8N441 504 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 FTMTQ8N4E7 242 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 ACBD7Q8N6N7 88 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 BOLLQ8N9W6 283 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 SCCPDHQ8NBX0 429 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 OR10Z1Q8NGY1 313 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 OR2G2Q8NGZ5 317 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 LINC01006Q8NI28 216 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 CNIH3Q8TBE1 160 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 SSMEM1Q8WWF3 244 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 DYRK2Q92630 601 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 PELI1Q96FA3 418 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 OR51I2Q9H344 312 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 RNPEPL1Q9HAU8 725 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 C8orf4Q9NR00 106 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 GPR173Q9NS66 373 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 ENPP5Q9UJA9 477 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 RNF114Q9Y508 228 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 TENM3Q9P273 2699 aa6.52□□□□□ -1.37
CDC42BPA-210ENST00000462553 TRAV38-1A0A0B4J264 116 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 IGHV1-69DA0A0B4J2H0 117 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 A0A0U1RQK1 487 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 DAPL1A0PJW8 107 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 A6NIN4 97 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 OR5B21A6NL26 309 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 ZNF732B4DXR9 585 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 TIMM23O14925 209 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 RHBDL1O75783 438 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 TOX4O94842 621 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 NRASP01111 189 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 IGHV1-69P01742 117 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 TFF1P04155 84 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 CRYBA1P05813 215 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 GNAO1P09471 354 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 UBCP0CG48 685 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 LIMS3P0CW19 117 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 LIMS4P0CW20 117 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 SELLP14151 372 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 ATP6V1E1P36543 226 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 IER3P46695 156 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 NPY4RP50391 375 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 GNG3P63215 75 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 RAB40BQ12829 278 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 GALEQ14376 348 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 PDCD1Q15116 288 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms