RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 XGP55808 180 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 CLDN8P56748 225 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 ERVK11-1P61568 191 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 GLO1Q04760 184 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 EGFEM1PQ0D2K5 195 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 CASP8Q14790 479 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 HIST3H3Q16695 136 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 ZNF181Q2M3W8 571 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 ATAD3BQ5T9A4 648 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 WDR25Q64LD2 544 aaPredicted RBP3.8□□□□□ -1.8
COPS3-204ENST00000462236 OR4F3Q6IEY1 312 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 DHRS11Q6UWP2 260 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 C5orf46Q6UWT4 87 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 ZNF836Q6ZNA1 936 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 NET1Q7Z628 596 aaPredicted RBP3.8□□□□□ -1.8
COPS3-204ENST00000462236 DPPA2Q7Z7J5 298 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 SNX32Q86XE0 403 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 C1orf174Q8IYL3 243 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 SLC22A24Q8N4F4 322 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 CCNYL1Q8N7R7 359 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 ANKFN1Q8N957 763 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 SPATA4Q8NEY3 305 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 OR2T6Q8NHC8 308 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 SLC25A40Q8TBP6 338 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 ACMSDQ8TDX5 336 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 SLC35B4Q969S0 331 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 CCDC126Q96EE4 140 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 LINC00479Q96M42 142 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 NAPGQ99747 312 aaPredicted RBP3.8□□□□□ -1.8
COPS3-204ENST00000462236 OVOL2Q9BRP0 275 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 TMEM246Q9BRR3 403 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 MCRIP2Q9BUT9 160 aaKnown RBP3.8□□□□□ -1.8
COPS3-204ENST00000462236 ULBP2Q9BZM5 246 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 SIRPDQ9H106 197 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 FN3KRPQ9HA64 309 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 B3GAT2Q9NPZ5 323 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 ACOXLQ9NUZ1 547 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 TMEM38BQ9NVV0 291 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 ZNRD1Q9P1U0 126 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 MIOXQ9UGB7 285 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 SAR1BQ9Y6B6 198 aa3.8□□□□□ -1.8
COPS3-204ENST00000462236 A0A087WUJ7 227 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 IGHV1-69DA0A0B4J2H0 117 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 LCE6AA0A183 80 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 C13orf42A0A1B0GVH6 325 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 A0A1B0GWJ7 208 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 MPTX1A8MV57 137 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 ZNF879B4DU55 563 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 PHYHO14832 338 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 CFLARO15519 480 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 PLIN3O60664 434 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 PTHP01270 115 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 IGHV1-69P01742 117 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 DBIP07108 87 aaKnown RBP3.79□□□□□ -1.8
COPS3-204ENST00000462236 SFTPBP07988 381 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 UQCRBP14927 111 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 KITLGP21583 273 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 AHCYP23526 432 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 TGFBR2P37173 567 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 KIR2DS4P43632 304 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 VEGFCP49767 419 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 LUMP51884 338 aaPredicted RBP3.79□□□□□ -1.8
COPS3-204ENST00000462236 GNB2P62879 340 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 TNFAIP6P98066 277 aaPredicted RBP3.79□□□□□ -1.8
COPS3-204ENST00000462236 PUDPQ08623 228 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 BST1Q10588 318 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 PSG7Q13046 419 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 TBC1D28Q2M2D7 210 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 ZNF404Q494X3 552 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 FAM106AQ4KMX7 169 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 THEM4Q5T1C6 240 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 CASC10Q5T4H9 136 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 IL23RQ5VWK5 629 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 CARD17Q5XLA6 110 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
COPS3-204ENST00000462236 ZCCHC23Q6ZST2 131 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 RFPL4BQ6ZWI9 263 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 PIGWQ7Z7B1 504 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 ZER1Q7Z7L7 766 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 VRK2Q86Y07 508 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 CROCCP3Q8IVE0 287 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 OR6X1Q8NH79 312 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 TWIST2Q8WVJ9 160 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 ITLN1Q8WWA0 313 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 SLC25A36Q96CQ1 311 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 PPP3R2Q96LZ3 170 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 ZNF607Q96SK3 696 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 SH3GL3Q99963 347 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 OR2J1Q9GZK6 312 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 OR51B6Q9H340 312 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 C5orf66Q9H5L9 145 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 MRPL39Q9NYK5 338 aaKnown RBP3.79□□□□□ -1.8
COPS3-204ENST00000462236 GLTPQ9NZD2 209 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 IL19Q9UHD0 177 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 VPREB3Q9UKI3 123 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 FOXJ3Q9UPW0 622 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 UTP11Q9Y3A2 253 aaKnown RBP3.79□□□□□ -1.8
COPS3-204ENST00000462236 USH1CQ9Y6N9 552 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 DNAH6Q9C0G6 4158 aa3.79□□□□□ -1.8
COPS3-204ENST00000462236 TRAV36DV7A0A075B6V5 113 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms