RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 SRSF4Q08170 494 aaKnown RBP17.48■□□□□ 0.39
CCM2-203ENST00000461377 NKAPLQ5M9Q1 402 aa17.48■□□□□ 0.39
CCM2-203ENST00000461377 LPCAT3Q6P1A2 487 aa17.48■□□□□ 0.39
CCM2-203ENST00000461377 LHFPL1Q86WI0 220 aa17.48■□□□□ 0.39
CCM2-203ENST00000461377 OR56B2PQ8NGI1 322 aa17.48■□□□□ 0.39
CCM2-203ENST00000461377 MITD1Q8WV92 249 aa17.48■□□□□ 0.39
CCM2-203ENST00000461377 DPCDQ9BVM2 203 aaPredicted RBP17.48■□□□□ 0.39
CCM2-203ENST00000461377 ZNF850A8MQ14 1090 aa17.47■□□□□ 0.39
CCM2-203ENST00000461377 ERVH48-1M5A8F1 160 aa17.47■□□□□ 0.39
CCM2-203ENST00000461377 TAS2R31P59538 309 aa17.47■□□□□ 0.39
CCM2-203ENST00000461377 SEC61A1P61619 476 aaKnown RBP17.47■□□□□ 0.39
CCM2-203ENST00000461377 PLP2Q04941 152 aa17.47■□□□□ 0.39
CCM2-203ENST00000461377 MALLQ13021 153 aa17.47■□□□□ 0.39
CCM2-203ENST00000461377 TAF9Q16594 264 aa17.47■□□□□ 0.39
CCM2-203ENST00000461377 BCL2L2Q92843 193 aaPredicted RBP17.47■□□□□ 0.39
CCM2-203ENST00000461377 MRPS24Q96EL2 167 aaKnown RBP17.47■□□□□ 0.39
CCM2-203ENST00000461377 GMPPAQ96IJ6 420 aaPredicted RBP17.47■□□□□ 0.39
CCM2-203ENST00000461377 CLEC4MQ9H2X3 399 aaPredicted RBP17.47■□□□□ 0.39
CCM2-203ENST00000461377 GPR160Q9UJ42 338 aa17.47■□□□□ 0.39
CCM2-203ENST00000461377 GPR132Q9UNW8 380 aa17.47■□□□□ 0.39
CCM2-203ENST00000461377 FREM1Q5H8C1 2179 aa17.47■□□□□ 0.39
CCM2-203ENST00000461377 L7N2F9 121 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 ZNHIT1O43257 154 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 HLA-GP17693 338 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 C4BPBP20851 252 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 OR3A3P47888 321 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 OPCMLQ14982 345 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 OSR2Q8N2R0 312 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 OR5AP2Q8NGF4 316 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 OR13G1Q8NGZ3 307 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 MAFIPQ8WZ33 124 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 CLCF1Q9UBD9 225 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 OSGIN2Q9Y236 505 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 MYO7BQ6PIF6 2116 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 DNAJC13O75165 2243 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 FPR2P25090 351 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 CHATP28329 748 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 IL13RA1P78552 427 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 CLN3Q13286 438 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 HIKESHIQ53FT3 197 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 RPUSD3Q6P087 351 aaKnown RBP17.46■□□□□ 0.39
CCM2-203ENST00000461377 MRPL21Q7Z2W9 205 aaKnown RBP17.46■□□□□ 0.39
CCM2-203ENST00000461377 PEG10Q86TG7 708 aaKnown RBP17.46■□□□□ 0.39
CCM2-203ENST00000461377 TMEM17Q86X19 198 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 STARD10Q9Y365 291 aa17.46■□□□□ 0.39
CCM2-203ENST00000461377 TRAV17A0A0B4J275 112 aa17.45■□□□□ 0.38
CCM2-203ENST00000461377 M0R233 179 aa17.45■□□□□ 0.38
CCM2-203ENST00000461377 MSTNO14793 375 aa17.45■□□□□ 0.38
CCM2-203ENST00000461377 CD8AP01732 235 aa17.45■□□□□ 0.38
CCM2-203ENST00000461377 AKR1C4P17516 323 aa17.45■□□□□ 0.38
CCM2-203ENST00000461377 NPY4RP50391 375 aa17.45■□□□□ 0.38
CCM2-203ENST00000461377 IKZF1Q13422 519 aa17.45■□□□□ 0.38
CCM2-203ENST00000461377 OVCH2Q7RTZ1 564 aa17.45■□□□□ 0.38
CCM2-203ENST00000461377 ZSCAN4Q8NAM6 433 aaPredicted RBP17.45■□□□□ 0.38
CCM2-203ENST00000461377 TMEM185AQ8NFB2 350 aa17.45■□□□□ 0.38
CCM2-203ENST00000461377 PHB2Q99623 299 aa17.45■□□□□ 0.38
CCM2-203ENST00000461377 PAPOLGQ9BWT3 736 aaKnown RBP17.45■□□□□ 0.38
CCM2-203ENST00000461377 PPA2Q9H2U2 334 aa17.45■□□□□ 0.38
CCM2-203ENST00000461377 C5orf66Q9H5L9 145 aa17.45■□□□□ 0.38
CCM2-203ENST00000461377 ZNF701Q9NV72 531 aaPredicted RBP17.45■□□□□ 0.38
CCM2-203ENST00000461377 EHFQ9NZC4 300 aa17.45■□□□□ 0.38
CCM2-203ENST00000461377 ZNF581Q9P0T4 197 aa17.45■□□□□ 0.38
CCM2-203ENST00000461377 PQLC2LA1A4F0 135 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 DUS4LO95620 317 aaKnown RBP17.44■□□□□ 0.38
CCM2-203ENST00000461377 CST4P01036 141 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 SFTPBP07988 381 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 PPP3CBP16298 524 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 PRDX4Q13162 271 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 HLXQ14774 488 aaPredicted RBP17.44■□□□□ 0.38
CCM2-203ENST00000461377 CHRFAM7AQ494W8 412 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 AADACL3Q5VUY0 350 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 P4HA3Q7Z4N8 544 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 CALHM1Q8IU99 346 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 FBXL14Q8N1E6 418 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 OR51F2Q8NH61 342 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 NANOS1Q8WY41 292 aaKnown RBP17.44■□□□□ 0.38
CCM2-203ENST00000461377 HDHD3Q9BSH5 251 aaPredicted RBP17.44■□□□□ 0.38
CCM2-203ENST00000461377 FAAP24Q9BTP7 215 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 OPA3Q9H6K4 179 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 PCDHB16Q9NRJ7 776 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 GLRX2Q9NS18 164 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 CRIM1Q9NZV1 1036 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 AK3Q9UIJ7 227 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 PTPRBP23467 1997 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 IGKV1D-8A0A087WSZ0 117 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 FXYD6-FXYD2A0A087WZ82 144 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 TRAV14DV4A0A0A6YYC5 116 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 RFPL4AA6NLU0 287 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 RFPL4AL1F8VTS6 287 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 SDCBPO00560 298 aaPredicted RBP17.44■□□□□ 0.38
CCM2-203ENST00000461377 GEMIN2O14893 280 aaKnown RBP17.44■□□□□ 0.38
CCM2-203ENST00000461377 RRP8O43159 456 aaKnown RBP17.44■□□□□ 0.38
CCM2-203ENST00000461377 NGFP01138 241 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 APLNRP35414 380 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 GMFBP60983 142 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 SORDQ00796 357 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 DEFB109BQ30KR1 87 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 PIGYQ3MUY2 71 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 LIN54Q6MZP7 749 aa17.44■□□□□ 0.38
CCM2-203ENST00000461377 NAXEQ8NCW5 288 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms