RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 HIST1H1DP16402 221 aaKnown RBP8.06□□□□□ -1.12
BRCA1-205ENST00000461221 LYZP61626 148 aa8.06□□□□□ -1.12
BRCA1-205ENST00000461221 HLA-DRB3P79483 266 aa8.06□□□□□ -1.12
BRCA1-205ENST00000461221 ACVR1Q04771 509 aa8.06□□□□□ -1.12
BRCA1-205ENST00000461221 OR1C1Q15619 314 aa8.06□□□□□ -1.12
BRCA1-205ENST00000461221 SPATA46Q5T0L3 261 aa8.06□□□□□ -1.12
BRCA1-205ENST00000461221 MRM1Q6IN84 353 aaKnown RBP8.06□□□□□ -1.12
BRCA1-205ENST00000461221 TCTN3Q6NUS6 607 aa8.06□□□□□ -1.12
BRCA1-205ENST00000461221 NUFIP2Q7Z417 695 aaKnown RBP8.06□□□□□ -1.12
BRCA1-205ENST00000461221 SPICQ8N5J4 248 aa8.06□□□□□ -1.12
BRCA1-205ENST00000461221 OR5A2Q8NGI9 324 aa8.06□□□□□ -1.12
BRCA1-205ENST00000461221 IGSF23A1L1A6 192 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 K7ESM1 405 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 FCMRO60667 390 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 SRSF9Q13242 221 aaKnown RBP eCLIP8.05□□□□□ -1.12
BRCA1-205ENST00000461221 SLC25A35Q3KQZ1 300 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 TMEM207Q6UWW9 146 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 MAMSTRQ6ZN01 415 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 Q7L0L9 218 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 OR11G2Q8NGC1 345 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 DYRK2Q92630 601 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 PHF7Q9BWX1 381 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-205ENST00000461221 NAA60Q9H7X0 242 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 HCSTQ9UBK5 93 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 PLEKHB1Q9UF11 243 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-205ENST00000461221 RALYQ9UKM9 306 aaKnown RBP8.05□□□□□ -1.12
BRCA1-205ENST00000461221 PSG11Q9UQ72 335 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 TRAV17A0A0B4J275 112 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 MELTFP08582 738 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 GALP22466 123 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 AVPR2P30518 371 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 TGFBR1P36897 503 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 GPR3P46089 330 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 LGALS7P47929 136 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 GUCA2AQ02747 115 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 JMJD6Q6NYC1 403 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-205ENST00000461221 LIAT1Q6ZQX7 453 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 RIMKLAQ8IXN7 391 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 IL22RA2Q969J5 263 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 HSPB8Q9UJY1 196 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 TSPAN12O95859 305 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 HLA-GP17693 338 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 CD40P25942 277 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 IL24Q13007 206 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 HLA-DRB5Q30154 266 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 OR4C3Q8NH37 302 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 SCMH1Q96GD3 660 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 ASB16Q96NS5 453 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 C19orf43Q9BQ61 176 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 SLC25A37Q9NYZ2 338 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 ERRFI1Q9UJM3 462 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-205ENST00000461221 TCFL5Q9UL49 500 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 NAV1Q8NEY1 1877 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 PPIHO43447 177 aaKnown RBP8.05□□□□□ -1.12
BRCA1-205ENST00000461221 ACP1P24666 158 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 RPS27P42677 84 aaKnown RBP8.05□□□□□ -1.12
BRCA1-205ENST00000461221 SNRPEP62304 92 aaKnown RBP8.05□□□□□ -1.12
BRCA1-205ENST00000461221 UBE2L3P68036 154 aaKnown RBP8.05□□□□□ -1.12
BRCA1-205ENST00000461221 TIAL1Q01085 375 aaKnown RBP eCLIP8.05□□□□□ -1.12
BRCA1-205ENST00000461221 TMEM211Q6ICI0 200 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 PARM1Q6UWI2 310 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 MRGPREQ86SM8 312 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 ETFBKMTQ8IXQ9 262 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 TMEM251Q8N6I4 163 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 ANGPTL4Q9BY76 406 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 MRPL37Q9BZE1 423 aaKnown RBP8.05□□□□□ -1.12
BRCA1-205ENST00000461221 NXF2Q9GZY0 626 aaKnown RBP8.05□□□□□ -1.12
BRCA1-205ENST00000461221 ALG1L2C9J202 215 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 DHRS3O75911 302 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 INHBBP09529 407 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 RAG2P55895 527 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 SLC37A1P57057 533 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 INPP5JQ15735 1006 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-205ENST00000461221 HIST3H3Q16695 136 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 SLC35E4Q6ICL7 350 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 KIRREL2Q6UWL6 708 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 DHRS13Q6UX07 377 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 RAB24Q969Q5 203 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 DERL3Q96Q80 235 aa8.05□□□□□ -1.12
BRCA1-205ENST00000461221 ALKBH3Q96Q83 286 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-205ENST00000461221 WSB2Q9NYS7 404 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-205ENST00000461221 PHLPP1O60346 1717 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 LINC01553A4QN01 128 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 H3BVH4 76 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 KLK8O60259 260 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 GLULP15104 373 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 CAMPP49913 170 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 GLCCI1Q86VQ1 547 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 OR4S2Q8NH73 311 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 DOK1Q99704 481 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 PRO1933Q9H354 126 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 CYSLTR2Q9NS75 346 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 OR6C3Q9NZP0 311 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 CORTO00230 105 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 BRS3P32247 399 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 CDAP32320 146 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 SLC25A30Q5SVS4 291 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 MYOZ3Q8TDC0 251 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 LILRA5A6NI73 299 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 B4DEV8 164 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms