RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 FBXO44Q9H4M3 255 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 IFNKQ9P0W0 207 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 VAX2Q9UIW0 290 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 LOC100506127A0A0U1RQW1 187 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 A0A1W2PRF3 423 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 A0A1W2PRM7 423 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 TMEM72A0PK05 275 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 POLR3GO15318 223 aaPredicted RBP2.33□□□□□ -2.04
VBP1-202ENST00000460509 KLHL2O95198 593 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 NPPAP01160 153 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 CFHR2P36980 270 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 NUP62P37198 522 aaPredicted RBP2.33□□□□□ -2.04
VBP1-202ENST00000460509 RGS6P49758 472 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 LAMTOR4Q0VGL1 99 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 ST3GAL4Q11206 333 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 BIKQ13323 160 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 Q3ZCU0 254 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 ZNF678Q5SXM1 525 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 LIN9Q5TKA1 542 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 VTCN1Q7Z7D3 282 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 ITPRIPQ8IWB1 547 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 SLC26A10Q8NG04 563 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 OR6K6Q8NGW6 343 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 MITD1Q8WV92 249 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 TFGQ92734 400 aaPredicted RBP2.33□□□□□ -2.04
VBP1-202ENST00000460509 TVP23CQ96ET8 276 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 OR51B5Q9H339 312 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 HMGXB4Q9UGU5 601 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 KPTNQ9Y664 436 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 SLC22A7Q9Y694 548 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 MAP3K19Q56UN5 1328 aa2.33□□□□□ -2.04
VBP1-202ENST00000460509 A0A1W2PNN7 141 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 A0A1W2PPV4 95 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 J3QT63 122 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 NDUFS5O43920 106 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 IGKV1D-16P01601 117 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 MBP02144 154 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 TGM4P49221 684 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 ATP5G2Q06055 141 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 TAF9Q16594 264 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 HNRNPA1L2Q32P51 320 aaKnown RBP2.32□□□□□ -2.04
VBP1-202ENST00000460509 TMEM69Q5SWH9 247 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 ADM2Q7Z4H4 148 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 LINC00523Q86TU6 105 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 LRRC8AQ8IWT6 810 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 OR2M7Q8NG81 312 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 CIDECQ96AQ7 238 aaPredicted RBP2.32□□□□□ -2.04
VBP1-202ENST00000460509 ZBED3Q96IU2 234 aaPredicted RBP2.32□□□□□ -2.04
VBP1-202ENST00000460509 C6orf50Q9HD87 102 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 LZTFL1Q9NQ48 299 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 OR2S2Q9NQN1 319 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 AGPAT3Q9NRZ7 376 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 STX18Q9P2W9 335 aaKnown RBP2.32□□□□□ -2.04
VBP1-202ENST00000460509 ZNF230Q9UIE0 474 aaPredicted RBP2.32□□□□□ -2.04
VBP1-202ENST00000460509 NOSIPQ9Y314 301 aaKnown RBP2.32□□□□□ -2.04
VBP1-202ENST00000460509 KLF12Q9Y4X4 402 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 TRIP11Q15643 1979 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 NPHP4O75161 1426 aaPredicted RBP2.32□□□□□ -2.04
VBP1-202ENST00000460509 RPRD2Q5VT52 1461 aaKnown RBP2.32□□□□□ -2.04
VBP1-202ENST00000460509 SEC16AO15027 2179 aa2.32□□□□□ -2.04
VBP1-202ENST00000460509 IGHV2OR16-5A0A0B4J2B6 119 aa2.31□□□□□ -2.04
VBP1-202ENST00000460509 YKT6O15498 198 aa2.31□□□□□ -2.04
VBP1-202ENST00000460509 IGLV6-57P01721 117 aa2.31□□□□□ -2.04
VBP1-202ENST00000460509 IGHV1-46P01743 117 aa2.31□□□□□ -2.04
VBP1-202ENST00000460509 CDK1P06493 297 aa2.31□□□□□ -2.04
VBP1-202ENST00000460509 SEC11BP0C7V7 166 aa2.31□□□□□ -2.04
VBP1-202ENST00000460509 STAG3L2P0CL84 134 aa2.31□□□□□ -2.04
VBP1-202ENST00000460509 HLA-GP17693 338 aa2.31□□□□□ -2.04
VBP1-202ENST00000460509 HCCSP53701 268 aa2.31□□□□□ -2.04
VBP1-202ENST00000460509 SLC35B1P78383 322 aa2.31□□□□□ -2.04
VBP1-202ENST00000460509 CPTPQ5TA50 214 aa2.31□□□□□ -2.04
VBP1-202ENST00000460509 MORN3Q6PF18 240 aaPredicted RBP2.31□□□□□ -2.04
VBP1-202ENST00000460509 SLC35D2Q76EJ3 337 aa2.31□□□□□ -2.04
VBP1-202ENST00000460509 RNF10Q8N5U6 811 aaKnown RBP2.31□□□□□ -2.04
VBP1-202ENST00000460509 NDNFQ8TB73 568 aa2.31□□□□□ -2.04
VBP1-202ENST00000460509 MRPL20Q9BYC9 149 aaKnown RBP2.31□□□□□ -2.04
VBP1-202ENST00000460509 API5Q9BZZ5 524 aaKnown RBP2.31□□□□□ -2.04
VBP1-202ENST00000460509 ORC6Q9Y5N6 252 aa2.31□□□□□ -2.04
VBP1-202ENST00000460509 ELP1O95163 1332 aa2.31□□□□□ -2.04
VBP1-202ENST00000460509 SBNO1A3KN83 1393 aa2.31□□□□□ -2.04
VBP1-202ENST00000460509 HSBP1L1C9JCN9 74 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 H7C2Y5 167 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 P0C880 135 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 ZNF35P13682 527 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 PTNP21246 168 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 PAX6P26367 422 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 CSKP41240 450 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 ZNF235Q14590 738 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 PMVKQ15126 192 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 ATP6V1FQ16864 119 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 DEFB134Q4QY38 66 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 HSP90B2PQ58FF3 399 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 SLC25A25Q6KCM7 469 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 ARHGAP18Q8N392 663 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 ASCC1Q8N9N2 400 aaKnown RBP2.3□□□□□ -2.04
VBP1-202ENST00000460509 OR4D6Q8NGJ1 314 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 ORAOV1Q8WV07 137 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 SMARCD1Q96GM5 515 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 MSANTD3Q96H12 275 aa2.3□□□□□ -2.04
VBP1-202ENST00000460509 CHMP4BQ9H444 224 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms