RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 CSNK2A3Q8NEV1 391 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 SLC25A43Q8WUT9 341 aaPredicted RBP13.58□□□□□ -0.24
LMNB1-203ENST00000460265 AKR1E2Q96JD6 320 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 G6PC2Q9NQR9 355 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 PIGLQ9Y2B2 252 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 PMS2P2O95744 297 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 RCC1P18754 421 aaPredicted RBP13.58□□□□□ -0.24
LMNB1-203ENST00000460265 EXT1Q16394 746 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 CDPF1Q6NVV7 123 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 AAED1Q7RTV5 226 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 NKAIN3Q8N8D7 197 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 NEK7Q8TDX7 302 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 RNF166Q96A37 237 aaPredicted RBP13.58□□□□□ -0.24
LMNB1-203ENST00000460265 LHFPL6Q9Y693 200 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 EML5Q05BV3 1969 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 ZFHX2Q9C0A1 2572 aaPredicted RBP13.57□□□□□ -0.24
LMNB1-203ENST00000460265 RNF222A6NCQ9 220 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 TSTD3H0UI37 97 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 RAB5AP20339 215 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 NME2P22392 152 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 KIAA0141Q14154 515 aaPredicted RBP13.57□□□□□ -0.24
LMNB1-203ENST00000460265 ZNF345Q14585 488 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 GJC3Q8NFK1 279 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 ACKR4Q9NPB9 350 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 HDGFL3Q9Y3E1 203 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 LOXL2Q9Y4K0 774 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 HSPB2A8KAH6 182 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 FAM166BA8MTA8 275 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 ANGPTL7O43827 346 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 IFNA17P01571 189 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 MSR1P21757 451 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 G0S2P27469 103 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 MECP2P51608 486 aaKnown RBP13.57□□□□□ -0.24
LMNB1-203ENST00000460265 HSPB2Q16082 182 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 LY6G6FQ5SQ64 297 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 RNF144BQ7Z419 303 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 REC114Q7Z4M0 266 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 TGIF2LXQ8IUE1 241 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 TMEM104Q8NE00 496 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 THOC3Q96J01 351 aaKnown RBP13.57□□□□□ -0.24
LMNB1-203ENST00000460265 CRLF2Q9HC73 371 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 GPR173Q9NS66 373 aa13.57□□□□□ -0.24
LMNB1-203ENST00000460265 GAR1Q9NY12 217 aaKnown RBP13.57□□□□□ -0.24
LMNB1-203ENST00000460265 NUDT19A8MXV4 375 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 IFNA2P01563 188 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 MMP16P51512 607 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 MTCP1P56278 107 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 PDCD1Q15116 288 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 SPINK14Q6IE38 97 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 OR5AP2Q8NGF4 316 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 OR10D4PQ8NGN7 298 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 STRADBQ9C0K7 418 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 FN3KRPQ9HA64 309 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 WASF3Q9UPY6 502 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 EML6Q6ZMW3 1958 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 TMEM131Q92545 1883 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 SOCS1O15524 211 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 DHHO43323 396 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 RSU1Q15404 277 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 UBAC2Q8NBM4 344 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 OR2Y1Q8NGV0 311 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 OCSTAMPQ9BR26 566 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 RGCCQ9H4X1 137 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 B3GAT1Q9P2W7 334 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 CBY1Q9Y3M2 126 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 MUC3AQ02505 3323 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 IGLV3-12A0A075B6K2 115 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 A0A1B0GWJ7 208 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 TRAF3IP2O43734 574 aaPredicted RBP13.56□□□□□ -0.24
LMNB1-203ENST00000460265 IGHV2-5P01817 119 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 ARG1P05089 322 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 VSIG8P0DPA2 414 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 PCOLCEQ15113 449 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 ABHD17BQ5VST6 288 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 BRICD5Q6PL45 260 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 IL34Q6ZMJ4 242 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 MARCH1Q8TCQ1 289 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 CST11Q9H112 138 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 PLEKHJ1Q9NW61 149 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 PLA2G3Q9NZ20 509 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 PRR13Q9NZ81 148 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 FREM1Q5H8C1 2179 aa13.56□□□□□ -0.24
LMNB1-203ENST00000460265 FAM221AA4D161 298 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 M0R135 149 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 SFTPBP07988 381 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 RPS10P46783 165 aaKnown RBP13.55□□□□□ -0.24
LMNB1-203ENST00000460265 CYB561P49447 251 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 CHRFAM7AQ494W8 412 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 PDZD11Q5EBL8 140 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 MCEMP1Q8IX19 187 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 OR5H2Q8NGV7 314 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 DCUN1D4Q92564 292 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 ZNF799Q96GE5 643 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 LRP4O75096 1905 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 POLEQ07864 2286 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 A0A096LPE4 126 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 A0A0J9YW62 118 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 A0A1W2PPZ6 126 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 LOC390937A0A1W2PQ73 354 aa13.55□□□□□ -0.24
LMNB1-203ENST00000460265 MAML2Q8IZL2 1156 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms