RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 BMI1P35226 326 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 PTGER4P35408 488 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 SNCAP37840 140 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 OR1D4P47884 311 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 GFERP55789 205 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 SOX8P57073 446 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 TLE3Q04726 772 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 ARFRP1Q13795 201 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 KIAA0895LQ68EN5 471 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 OR2A2Q6IF42 318 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 GKN2Q86XP6 184 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 C7orf61Q8IZ16 206 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 OR8B12Q8NGG6 310 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 OR56B2PQ8NGI1 322 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 OR8U1Q8NH10 309 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 SECTM1Q8WVN6 248 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.47□□□□□ -1.21
VPS50-208ENST00000458707 MRPL38Q96DV4 380 aaKnown RBP7.47□□□□□ -1.21
VPS50-208ENST00000458707 MALSU1Q96EH3 234 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 AKR1E2Q96JD6 320 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 ZNF385AQ96PM9 386 aaKnown RBP7.47□□□□□ -1.21
VPS50-208ENST00000458707 SPACA5Q96QH8 159 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 NAA11Q9BSU3 229 aaPredicted RBP7.47□□□□□ -1.21
VPS50-208ENST00000458707 OR10A2Q9H208 303 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 TMPRSS5Q9H3S3 457 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 BANF2Q9H503 90 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 DECR2Q9NUI1 292 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 SOHLH2Q9NX45 425 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 GHRLQ9UBU3 117 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 FBXL17Q9UF56 701 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 AMDHD2Q9Y303 409 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 MYO9BQ13459 2157 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 A0A1W2PP11 408 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 TCRBV21S2A2A0A5A6 115 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 LIPT2A6NK58 231 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 K7EPK0 472 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 ETV2O00321 342 aaPredicted RBP7.47□□□□□ -1.21
VPS50-208ENST00000458707 IGLV3-19P01714 112 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 HOXB5P09067 269 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 LMO1P25800 156 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 FCGR2CP31995 323 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 MAS1LP35410 378 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 OR3A2P47893 321 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 HTR5AP47898 357 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 PPT1P50897 306 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 SNU13P55769 128 aaKnown RBP7.47□□□□□ -1.21
VPS50-208ENST00000458707 SUMO3P55854 103 aaPredicted RBP7.47□□□□□ -1.21
VPS50-208ENST00000458707 BIDP55957 195 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 S100A10P60903 97 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 SLC25A24Q6NUK1 477 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 CRIP3Q6Q6R5 217 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 TTLL10Q6ZVT0 673 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 FAM71E2Q8N5Q1 922 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 OR9K2Q8NGE7 335 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 HLA-CQ95604 372 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 CDX2Q99626 313 aaPredicted RBP7.47□□□□□ -1.21
VPS50-208ENST00000458707 PRRX2Q99811 253 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 LRFN3Q9BTN0 628 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 TM2D1Q9BX74 207 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 RAB33BQ9H082 229 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 PLEKHA2Q9HB19 425 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 GPR84Q9NQS5 396 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 SERINC1Q9NRX5 453 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 ALKBH4Q9NXW9 302 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 EHFQ9NZC4 300 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 GSKIPQ9P0R6 139 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 B3GAT1Q9P2W7 334 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 SUSD2Q9UGT4 822 aa7.47□□□□□ -1.21
VPS50-208ENST00000458707 IGKV1-9A0A0C4DH69 117 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 C7orf77A4D0Y5 90 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 SERPINE3A8MV23 424 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 SDCBPO00560 298 aaPredicted RBP7.46□□□□□ -1.22
VPS50-208ENST00000458707 AGPAT2O15120 278 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 IGLV3-1P01715 115 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 SFTPBP07988 381 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 SEC11BP0C7V7 166 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 DANCRP0C864 163 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 ACKR3P25106 362 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 ITGA3P26006 1051 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 GLP1RP43220 463 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 ID4P47928 161 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 DHPSP49366 369 aaPredicted RBP7.46□□□□□ -1.22
VPS50-208ENST00000458707 TMEM33P57088 247 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 ZNF121P58317 390 aaPredicted RBP7.46□□□□□ -1.22
VPS50-208ENST00000458707 CSNK2A1P68400 391 aaPredicted RBP7.46□□□□□ -1.22
VPS50-208ENST00000458707 NHLH2Q02577 135 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 C17orf67Q0P5P2 114 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 ARL6IP1Q15041 203 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 NSDHLQ15738 373 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 KCNMB1Q16558 191 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 IAH1Q2TAA2 248 aaPredicted RBP7.46□□□□□ -1.22
VPS50-208ENST00000458707 AWAT1Q58HT5 328 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 CYB5R2Q6BCY4 276 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 RTL6Q6ICC9 239 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 DOK3Q7L591 496 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 ABHD12BQ7Z5M8 362 aaPredicted RBP7.46□□□□□ -1.22
VPS50-208ENST00000458707 C17orf82Q86X59 251 aaPredicted RBP7.46□□□□□ -1.22
VPS50-208ENST00000458707 TGIF2LXQ8IUE1 241 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 ADPRHL1Q8NDY3 354 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 CSNK2A3Q8NEV1 391 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms