RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 TSTD1Q8NFU3 115 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 OR10G4Q8NGN3 311 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 OR10R2Q8NGX6 335 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 OR6F1Q8NGZ6 308 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 ARL11Q969Q4 196 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 UPRTQ96BW1 309 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 DNAJC30Q96LL9 226 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 RCHY1Q96PM5 261 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 ZNF649Q9BS31 505 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 MARVELD1Q9BSK0 173 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 C16orf70Q9BSU1 422 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 DPCDQ9BVM2 203 aaPredicted RBP4.65□□□□□ -1.67
VPS41-209ENST00000457055 TAPBPLQ9BX59 468 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 VN1R3Q9BXE9 311 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 VN1R1Q9GZP7 353 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 MAP1LC3BQ9GZQ8 125 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 CST9LQ9H4G1 147 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 CDCP1Q9H5V8 836 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 ZNF696Q9H7X3 374 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 ZDHHC11Q9H8X9 412 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 PHPT1Q9NRX4 125 aaPredicted RBP4.65□□□□□ -1.67
VPS41-209ENST00000457055 ABHD10Q9NUJ1 306 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 TMEM38BQ9NVV0 291 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 ARMCX1Q9P291 453 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 B3GAT1Q9P2W7 334 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 PILRBQ9UKJ0 227 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 RCL1Q9Y2P8 373 aaKnown RBP4.65□□□□□ -1.67
VPS41-209ENST00000457055 LSM5Q9Y4Y9 91 aaKnown RBP4.65□□□□□ -1.67
VPS41-209ENST00000457055 PRRC2BQ5JSZ5 2229 aaKnown RBP4.64□□□□□ -1.67
VPS41-209ENST00000457055 ZNF318Q5VUA4 2279 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 TRAV18A0A075B6X5 111 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 KIR2DS5A0A0G2JLQ3 304 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 A0A0G2JNG1 304 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 TRBV4-1A0A0J9YWV2 114 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 A0A1B0GW55 424 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 TMEM72A0PK05 275 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 TMEM218A2RU14 115 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 B4DGG1 531 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 LMO7DNF2Z398 122 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 DEGS1O15121 323 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 MBTPS2O43462 519 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 OR7C2O60412 319 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 MT-CO3P00414 261 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 IGF1P05019 195 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 DUX4L2P0CJ85 424 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 DUX4L3P0CJ86 424 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 DUX4L5P0CJ88 424 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 DUX4L6P0CJ89 424 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 DUX4L7P0CJ90 424 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 MATN1P21941 496 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 GATA3P23771 443 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 ZBTB25P24278 435 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 HTR1DP28221 377 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 CD34P28906 385 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 ADORA2AP29274 412 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 PYCR1P32322 319 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 APLNRP35414 380 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 LEPP41159 167 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 MNDAP41218 407 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 CDKN2BP42772 138 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 RIPPLY3P57055 190 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 ABCE1P61221 599 aaKnown RBP4.64□□□□□ -1.67
VPS41-209ENST00000457055 SELENOWP63302 87 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 SLC18A2Q05940 514 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 KIR2DS5Q14953 304 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 ST3GAL2Q16842 350 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 DUOXA1Q1HG43 343 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 CD300EQ496F6 205 aaPredicted RBP4.64□□□□□ -1.67
VPS41-209ENST00000457055 ZNF672Q499Z4 452 aaPredicted RBP4.64□□□□□ -1.67
VPS41-209ENST00000457055 FFAR4Q5NUL3 377 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 CPTPQ5TA50 214 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 GSG1LQ6UXU4 331 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 Q6ZT83 130 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 ASRGL1Q7L266 308 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 TSEN54Q7Z6J9 526 aaKnown RBP4.64□□□□□ -1.67
VPS41-209ENST00000457055 SNX29P2Q8IUI4 249 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 DND1Q8IYX4 353 aaKnown RBP4.64□□□□□ -1.67
VPS41-209ENST00000457055 MUC15Q8N387 334 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 C11orf42Q8N5U0 333 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 PNPLA1Q8N8W4 532 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 UBAC2Q8NBM4 344 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 CHST4Q8NCG5 386 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 GJC3Q8NFK1 279 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 RNF138Q8WVD3 245 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 TMEM170AQ8WVE7 144 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 PCNPQ8WW12 178 aaKnown RBP4.64□□□□□ -1.67
VPS41-209ENST00000457055 CYGBQ8WWM9 190 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 DEDD2Q8WXF8 326 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 RCN3Q96D15 328 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 CNBD2Q96M20 576 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 ZNF488Q96MN9 340 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 GPER1Q99527 375 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 FAAP24Q9BTP7 215 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 EFCAB11Q9BUY7 163 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 SNHG12Q9BXW3 62 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 TMEM126AQ9H061 195 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 FAM234AQ9H0X4 552 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 SLC25A51Q9H1U9 297 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 ABCG5Q9H222 651 aa4.64□□□□□ -1.67
VPS41-209ENST00000457055 ZNF385DQ9H6B1 395 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms