RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 DTYMKP23919 212 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 CCKARP32238 428 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 EIF1AXP47813 144 aaKnown RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 GLIPR1P48060 266 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 PDLIM4P50479 330 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 H3F3AP84243 136 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 PLAURQ03405 335 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 ZNF141Q15928 474 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 HIKESHIQ53FT3 197 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 CLEC12AQ5QGZ9 265 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 ANKRD16Q6P6B7 361 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 PRSS54Q6PEW0 395 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 IGF2-ASQ6U949 168 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 RPTNQ6XPR3 784 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 MBOAT2Q6ZWT7 520 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 NRMQ8IXM6 262 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 C10orf53Q8N6V4 93 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 OR14L1PQ8NHC6 308 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 SLC2A12Q8TD20 617 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 FAM71F1Q96KD3 344 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 CLUHP3Q96NS8 147 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 SLC46A1Q96NT5 459 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 TBX5Q99593 518 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 NKX3-1Q99801 234 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 PRSS27Q9BQR3 290 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 VN1R1Q9GZP7 353 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 TAF9BQ9HBM6 251 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 SRA1Q9HD15 236 aaKnown RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-218ENST00000456174 SLC2A8Q9NY64 477 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 CNIH4Q9P003 139 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 RARRES3Q9UL19 164 aa6.75□□□□□ -1.33
HDAC9-218ENST00000456174 LOC105371242A0A075B767 164 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 ZNF727A8MUV8 499 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 KLF4O43474 513 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 SCRG1O75711 98 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 TIAF1O95411 115 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 SLC2A10O95528 541 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 DDAH2O95865 285 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 CH25HO95992 272 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 PNPP00491 289 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 IGHEP01854 428 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 LCATP04180 440 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 IGKV3-11P04433 115 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 NBEAP1P0C6P0 100 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 ZNF735P0CB33 412 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 SP9P0CG40 484 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 LIPCP11150 499 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 CHRNB4P30926 498 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 DUSP3P51452 185 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-218ENST00000456174 OR12D2P58182 307 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 MIDNQ504T8 468 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 ALG10BQ5I7T1 473 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 PHF19Q5T6S3 580 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 SHISA6Q6ZSJ9 500 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 COX15Q7KZN9 410 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 DND1Q8IYX4 353 aaKnown RBP6.74□□□□□ -1.33
HDAC9-218ENST00000456174 C1orf87Q8N0U7 546 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 SLC38A9Q8NBW4 561 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 NOXO1Q8NFA2 376 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 OR2D3Q8NGH3 330 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 ZNF721Q8TF20 911 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 METTL21AQ8WXB1 218 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 RAB39BQ96DA2 213 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 SNX22Q96L94 193 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 PHB2Q99623 299 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 MIEN1Q9BRT3 115 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 PBDC1Q9BVG4 233 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 ANGPTL4Q9BY76 406 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 ZNF107Q9UII5 783 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-218ENST00000456174 ZNF223Q9UK11 482 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-218ENST00000456174 HEATR5AQ86XA9 2040 aa6.74□□□□□ -1.33
HDAC9-218ENST00000456174 LOC100509620A0A075B734 347 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 CBY3A6NI87 242 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 GPRIN2O60269 458 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 OR2J2O76002 312 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 WNT11O96014 354 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 CST4P01036 141 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 IFNA6P05013 189 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 CTXN2P0C2S0 81 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 PGA4P0DJD7 388 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 PGA5P0DJD9 388 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 FGF5P12034 268 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 PTNP21246 168 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 CSRP1P21291 193 aaKnown RBP6.73□□□□□ -1.33
HDAC9-218ENST00000456174 PYCR1P32322 319 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 NAA10P41227 235 aaPredicted RBP6.73□□□□□ -1.33
HDAC9-218ENST00000456174 GPR4P46093 362 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 TNFSF10P50591 281 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 RND2P52198 227 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 FAM3AP98173 230 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.73□□□□□ -1.33
HDAC9-218ENST00000456174 RNF151Q2KHN1 245 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 HYAL4Q2M3T9 481 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 SOHLH1Q5JUK2 328 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 RPL7L1Q6DKI1 246 aaKnown RBP6.73□□□□□ -1.33
HDAC9-218ENST00000456174 TMEM205Q6UW68 189 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 ZNF705AQ6ZN79 300 aaPredicted RBP6.73□□□□□ -1.33
HDAC9-218ENST00000456174 LINC01551Q86U37 167 aa6.73□□□□□ -1.33
HDAC9-218ENST00000456174 WDFY1Q8IWB7 410 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms