RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TGFBR3Q03167 851 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 NDUFA5Q16718 116 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 GTF3C1Q12789 2109 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 GEMIN2O14893 280 aaKnown RBP11.83□□□□□ -0.52
CLK3-203ENST00000454830 ZNF205O95201 554 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 KNG1P01042 644 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 CD74P04233 296 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 MELTFP08582 738 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 ZNF735P0CB33 412 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 NAT2P11245 290 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 PRDX4Q13162 271 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 DCAF12L2Q5VW00 463 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 MDP1Q86V88 176 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 ZNF611Q8N823 705 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 ZNF581Q9P0T4 197 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 ZNF391Q9UJN7 358 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 PCNX1Q96RV3 2341 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 MGAQ8IWI9 3026 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 C5orf51A6NDU8 294 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 MFNGO00587 321 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 SORDQ00796 357 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 PPP1R1AQ13522 171 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 SLC9A3R2Q15599 337 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 OR8H3Q8N146 312 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 CITED4Q96RK1 184 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 PPA2Q9H2U2 334 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 ZDHHC11Q9H8X9 412 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 FBLN5Q9UBX5 448 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 FRYQ5TBA9 3013 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 EEF1E1-BLOC1S5C9J1V9 151 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 GIPP09681 153 aaPredicted RBP11.82□□□□□ -0.52
CLK3-203ENST00000454830 CPN1P15169 458 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 PNLIPRP3Q17RR3 467 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 ADAD2Q8NCV1 583 aaKnown RBP11.82□□□□□ -0.52
CLK3-203ENST00000454830 CDH20Q9HBT6 801 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 COMMD9Q9P000 198 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 RGS13O14921 159 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 SFTPBP07988 381 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 DUSP1P28562 367 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 NUBP1P53384 320 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 OR2T2Q6IF00 324 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 OSR2Q8N2R0 312 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 SPICQ8N5J4 248 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 SLC30A7Q8NEW0 376 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 SNIP1Q8TAD8 396 aaKnown RBP11.82□□□□□ -0.52
CLK3-203ENST00000454830 SARAFQ96BY9 339 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 LRFN3Q9BTN0 628 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 ITGB1BP2Q9UKP3 347 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 KMT2EQ8IZD2 1858 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 BOD1L1Q8NFC6 3051 aa11.82□□□□□ -0.52
CLK3-203ENST00000454830 ZNF732B4DXR9 585 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 H2BFSP57053 126 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 ST8SIA4Q92187 359 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 SLAMF9Q96A28 289 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 C1QTNF5Q9BXJ0 243 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 PRDM14Q9GZV8 571 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 ANKRD30BLA7E2S9 258 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 M0R233 179 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 CBX5P45973 191 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 PDZK1IP1Q13113 114 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 LGALSLQ3ZCW2 172 aaPredicted RBP11.81□□□□□ -0.52
CLK3-203ENST00000454830 C3P1Q6ZMU1 363 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 CALHM1Q8IU99 346 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 OR1K1Q8NGR3 316 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 TERB2Q8NHR7 220 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 TOMM40LQ969M1 308 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 INTS1Q8N201 2190 aaKnown RBP11.81□□□□□ -0.52
CLK3-203ENST00000454830 OR14I1A6ND48 311 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 IL18BPO95998 194 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 ARL6IP1Q15041 203 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 GRK1Q15835 563 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 GMPPAQ96IJ6 420 aaPredicted RBP11.81□□□□□ -0.52
CLK3-203ENST00000454830 DLL3Q9NYJ7 618 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 PRR13Q9NZ81 148 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 KCNMB2Q9Y691 235 aa11.81□□□□□ -0.52
CLK3-203ENST00000454830 DHRS7CA6NNS2 312 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 SERPINE3A8MV23 424 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 FXYD4P59646 89 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 FOXC1Q12948 553 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 LIX1LQ8IVB5 337 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 ZDHHC23Q8IYP9 409 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 PHB2Q99623 299 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 CADP27708 2225 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 RPL36A-HNRNPH2H7BZ11 118 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 TPOP07202 933 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 NPBWR2P48146 333 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 TAS2R46P59540 309 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 TMPRSS13Q9BYE2 586 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 ZNF107Q9UII5 783 aaPredicted RBP11.8□□□□□ -0.52
CLK3-203ENST00000454830 IGKV1-12A0A0C4DH73 117 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 CD300LBA8K4G0 201 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 IGKV1D-12P01611 117 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 HOXD11P31277 338 aaPredicted RBP11.8□□□□□ -0.52
CLK3-203ENST00000454830 IGFBP7Q16270 282 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 NRN1LQ496H8 165 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 HAGHLQ6PII5 290 aaPredicted RBP11.8□□□□□ -0.52
CLK3-203ENST00000454830 SSC4DQ8WTU2 575 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 Q96M66 194 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 ARL6Q9H0F7 186 aa11.8□□□□□ -0.52
CLK3-203ENST00000454830 PIPOXQ9P0Z9 390 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms