RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 RPA2P15927 270 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 ACKR3P25106 362 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 TMEM65Q6PI78 240 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 CDH26Q8IXH8 852 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 CNEP1R1Q8N9A8 125 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 M1APQ8TC57 530 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 SIGLEC12Q96PQ1 595 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 MCTS1Q9ULC4 181 aaKnown RBP10.47□□□□□ -0.73
SMPD4-213ENST00000454468 FLVCR1Q9Y5Y0 555 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 RFPL4AA6NLU0 287 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 C10orf142B7Z368 130 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 RFPL4AL1F8VTS6 287 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 HS3ST1O14792 307 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 ASCL1P50553 236 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 SCAND1P57086 179 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 CSRP2Q16527 193 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 CLLU1Q5K131 121 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 C11orf87Q6NUJ2 197 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 SLC22A25Q6T423 547 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 SGPP2Q8IWX5 399 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 FGFBP3Q8TAT2 258 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 SCARB1Q8WTV0 552 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 SECTM1Q8WVN6 248 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 LYZL4Q96KX0 146 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 ZNF700Q9H0M5 742 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 TIMM10BQ9Y5J6 103 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 CUL9Q8IWT3 2517 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 SCGNO76038 276 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 OR5H8P0DN80 308 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 OMGP23515 440 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 PSMB6P28072 239 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 Q0VFX4 171 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 HNF4GQ14541 408 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 AQP3Q92482 292 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 SCGB3A2Q96PL1 93 aa10.47□□□□□ -0.73
SMPD4-213ENST00000454468 CEP192Q8TEP8 1941 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 XRCC2O43543 280 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 PRH1P02810 166 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 HPNP05981 417 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 SRD5A2P31213 254 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 GPM6AP51674 278 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 FOXG1P55316 489 aaPredicted RBP10.46□□□□□ -0.73
SMPD4-213ENST00000454468 PSG4Q00888 419 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 FAM166AQ6J272 317 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 C5orf24Q7Z6I8 188 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 SKA3Q8IX90 412 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 OR5M8Q8NGP6 311 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 RDH5Q92781 318 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 RAB6AP20340 208 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 GLP1RP43220 463 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 ZNF92Q03936 586 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 CNN3Q15417 329 aaKnown RBP10.46□□□□□ -0.73
SMPD4-213ENST00000454468 CLEC18BQ6UXF7 455 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 OR52H1Q8NGJ2 320 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 CPT1CQ8TCG5 803 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 WNT2BQ93097 391 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 PECRQ9BY49 303 aa10.46□□□□□ -0.73
SMPD4-213ENST00000454468 TRAV39A0A0B4J263 110 aa10.46□□□□□ -0.74
SMPD4-213ENST00000454468 WIPF3A6NGB9 483 aa10.46□□□□□ -0.74
SMPD4-213ENST00000454468 HSPA12AO43301 675 aa10.46□□□□□ -0.74
SMPD4-213ENST00000454468 NME2P22392 152 aa10.46□□□□□ -0.74
SMPD4-213ENST00000454468 IKZF1Q13422 519 aa10.46□□□□□ -0.74
SMPD4-213ENST00000454468 TRA2AQ13595 282 aaKnown RBP eCLIP10.46□□□□□ -0.74
SMPD4-213ENST00000454468 FADS6Q8N9I5 356 aa10.46□□□□□ -0.74
SMPD4-213ENST00000454468 OR56B2PQ8NGI1 322 aa10.46□□□□□ -0.74
SMPD4-213ENST00000454468 TAAR9Q96RI9 348 aa10.46□□□□□ -0.74
SMPD4-213ENST00000454468 SLC7A10Q9NS82 523 aa10.46□□□□□ -0.74
SMPD4-213ENST00000454468 KCNIP3Q9Y2W7 256 aa10.46□□□□□ -0.74
SMPD4-213ENST00000454468 TTLL8A6PVC2 850 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 SRSF10O75494 262 aaKnown RBP10.45□□□□□ -0.74
SMPD4-213ENST00000454468 SERPINA7P05543 415 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 FCGR2CP31995 323 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 PMP22Q01453 160 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 MALLQ13021 153 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 RAB32Q13637 225 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 SSPNQ14714 243 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 FAM189A2Q15884 450 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 SWI5Q1ZZU3 235 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.45□□□□□ -0.74
SMPD4-213ENST00000454468 DTWD2Q8NBA8 298 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 PXT1Q8NFP0 134 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 OR6S1Q8NH40 331 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 SLAMF9Q96A28 289 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 EDEM2Q9BV94 578 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 SLC26A1Q9H2B4 701 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 LUZP4Q9P127 313 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 TMEM265A0A087WTH1 108 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 LOC102725191A0A1B0GVB3 256 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 ZNF587BE7ETH6 402 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 G3V3Q6 166 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 EFSO43281 561 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 GSTP1P09211 210 aaKnown RBP10.45□□□□□ -0.74
SMPD4-213ENST00000454468 ZNF44P15621 663 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 EPHA1P21709 976 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 GNRHRP30968 328 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 NTF4P34130 210 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 P2RY4P51582 365 aa10.45□□□□□ -0.74
SMPD4-213ENST00000454468 LSM6P62312 80 aaKnown RBP10.45□□□□□ -0.74
SMPD4-213ENST00000454468 PPIAP62937 165 aaKnown RBP10.45□□□□□ -0.74
SMPD4-213ENST00000454468 TMEM128Q5BJH2 165 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms