RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 PRICKLE4Q2TBC4 344 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 ZNF750Q32MQ0 723 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 HNRNPA1L2Q32P51 320 aaKnown RBP3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 WIPI1Q5MNZ9 446 aaPredicted RBP3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 FAM162BQ5T6X4 162 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 C1orf140Q5VVS0 124 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 NCR3LG1Q68D85 454 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 LILRA6Q6PI73 481 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 KIRREL2Q6UWL6 708 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 CXCL17Q6UXB2 119 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 DOK3Q7L591 496 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 DPY19L4Q7Z388 723 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 MRGPRGQ86SM5 289 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 ATG4DQ86TL0 474 aaPredicted RBP3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 WDR5BQ86VZ2 330 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 ZNF547Q8IVP9 402 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 FOXRED2Q8IWF2 684 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 CMTM1Q8IZ96 169 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 CMTM8Q8IZV2 173 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 CRIPAKQ8N1N5 446 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 RFLNBQ8N5W9 214 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 OR2C3Q8N628 320 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 AMER3Q8N944 861 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 BOLLQ8N9W6 283 aaKnown RBP3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 AGBL5Q8NDL9 886 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 CSNK2A3Q8NEV1 391 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 OR56B2PQ8NGI1 322 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 OR4D6Q8NGJ1 314 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 OR5L1Q8NGL2 311 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 OR4D5Q8NGN0 318 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 OR13C9Q8NGT0 318 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 OR2G3Q8NGZ4 309 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 WFDC5Q8TCV5 224 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 GPR119Q8TDV5 335 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 NEK7Q8TDX7 302 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 Q8WTZ3 238 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 PTPMT1Q8WUK0 201 aaPredicted RBP3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 ORAOV1Q8WV07 137 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 RNF133Q8WVZ7 376 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 KCNE4Q8WWG9 221 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 TMEM234Q8WY98 164 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 IRF7Q92985 503 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 DVL3Q92997 716 aaPredicted RBP3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 SPSB1Q96BD6 273 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 RASD2Q96D21 266 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 SMIM12Q96EX1 92 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 SNX22Q96L94 193 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 MRGPRX4Q96LA9 322 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 ZNF558Q96NG5 402 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 IP6K3Q96PC2 410 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 TSSK2Q96PF2 358 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 LMF1Q96S06 567 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 RAB40CQ96S21 281 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 ATP5SQ99766 215 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 ZFYVE21Q9BQ24 234 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 PYGO2Q9BRQ0 406 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 LRFN3Q9BTN0 628 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 WNT5BQ9H1J7 359 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 OPN3Q9H1Y3 402 aaPredicted RBP3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 OR10A2Q9H208 303 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 OR51I2Q9H344 312 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 TXNIPQ9H3M7 391 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 NAA60Q9H7X0 242 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 ELL3Q9HB65 397 aaPredicted RBP3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 CRLF2Q9HC73 371 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 SPHK2Q9NRA0 654 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 SLC2A9Q9NRM0 540 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 ZNF586Q9NXT0 402 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 TAS2R4Q9NYW5 299 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 GSKIPQ9P0R6 139 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 SLC23A2Q9UGH3 650 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 CDC42EP3Q9UKI2 254 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 HSF4Q9ULV5 492 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 OSGIN2Q9Y236 505 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 VDAC3Q9Y277 283 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 MRPS28Q9Y2Q9 187 aaKnown RBP3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 LRP12Q9Y561 859 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 TIMM9Q9Y5J7 89 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 SLCO1B1Q9Y6L6 691 aa3.06□□□□□ -1.92
AC006539.3-201ENST00000454258 HEATR5BQ9P2D3 2071 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 DENND4CQ5VZ89 1909 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 COL4A3Q01955 1670 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 TMEM265A0A087WTH1 108 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 LOC102723971A0A1B0GUV8 181 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 A0A1W2PPE3 182 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 CDC14CA4D256 554 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 MEIS3P1A6NDR6 274 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 FAM90A10PA6NDY2 464 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 FAM90A18PA6NE21 464 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 FAM90A16PA6NEW6 464 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 MSGN1A6NI15 193 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 FAM90A20PA6NIJ5 464 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 FAM90A8PA6NJQ4 464 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 GLOD5A6NK44 160 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 FAM90A7PA6NKC0 464 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 ZNF705GA8MUZ8 300 aaPredicted RBP3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 HIDE1A8MVS5 230 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 FAM90A22PA8MWA6 464 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 FAM90A12PA8MX19 464 aa3.05□□□□□ -1.92
AC006539.3-201ENST00000454258 FAM90A5PA8MXJ8 464 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms