RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 PTHLHP12272 177 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 B4GALT1P15291 398 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 FSTP19883 344 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 CD34P28906 385 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 POU3F4P49335 361 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 PNLIPRP3Q17RR3 467 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 CORO6Q6QEF8 472 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.81□□□□□ -0.2
SNX17-204ENST00000453453 SKA3Q8IX90 412 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 ZNF679Q8IYX0 411 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 LRRC18Q8N456 261 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 SLC22A24Q8N4F4 322 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 ZNF676Q8N7Q3 588 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 ZDHHC22Q8N966 263 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 RELL2Q8NC24 303 aaPredicted RBP13.81□□□□□ -0.2
SNX17-204ENST00000453453 TMEM185AQ8NFB2 350 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 GJC3Q8NFK1 279 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 C4orf45Q96LM5 186 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 OR8B4Q96RC9 309 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 VRK1Q99986 396 aaPredicted RBP13.81□□□□□ -0.2
SNX17-204ENST00000453453 SFXN3Q9BWM7 321 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 TINAGQ9UJW2 476 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 GDF2Q9UK05 429 aaPredicted RBP13.81□□□□□ -0.2
SNX17-204ENST00000453453 LHFPL6Q9Y693 200 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 FREM1Q5H8C1 2179 aa13.81□□□□□ -0.2
SNX17-204ENST00000453453 TRAV8-7A0A075B6U6 113 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 CD3DP04234 171 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 CTSSP25774 331 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 CEACAM8P31997 349 aaPredicted RBP13.8□□□□□ -0.2
SNX17-204ENST00000453453 RAB13P51153 203 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 RIDAP52758 137 aaKnown RBP13.8□□□□□ -0.2
SNX17-204ENST00000453453 TGFBR3Q03167 851 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 ROM1Q03395 351 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 FOXF2Q12947 444 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 ENDOGQ14249 297 aaKnown RBP13.8□□□□□ -0.2
SNX17-204ENST00000453453 C9orf135Q5VTT2 229 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 TMEM211Q6ICI0 200 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 VWA1Q6PCB0 445 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 HAGHLQ6PII5 290 aaPredicted RBP13.8□□□□□ -0.2
SNX17-204ENST00000453453 DEGS2Q6QHC5 323 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 SLC16A14Q7RTX9 510 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 ST7LQ8TDW4 575 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 FAM3DQ96BQ1 224 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 SLAMF6Q96DU3 332 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 PLSCR4Q9NRQ2 329 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 COA4Q9NYJ1 87 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 SH3BGRL2Q9UJC5 107 aa13.8□□□□□ -0.2
SNX17-204ENST00000453453 ZNF878C9JN71 531 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 F8VVB4 439 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 F8VWA3 439 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 PSMD9O00233 223 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 TNFSF13O75888 250 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 H2BFMP0C1H6 154 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 OPRM1P35372 400 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 SOX2P48431 317 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 LUMP51884 338 aaPredicted RBP13.79□□□□□ -0.2
SNX17-204ENST00000453453 PMPCAQ10713 525 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 TAF13Q15543 124 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 KLHL24Q6TFL4 600 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 IL34Q6ZMJ4 242 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 Q6ZT83 130 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 ZNF627Q7L945 461 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 RPRMLQ8N4K4 120 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 DMBX1Q8NFW5 382 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 OR4D10Q8NGI6 311 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 RNF133Q8WVZ7 376 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 ARL11Q969Q4 196 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 TMEM106AQ96A25 262 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 AMELYQ99218 206 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 PRRT1Q99946 306 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 UQCC2Q9BRT2 126 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 ELOVL3Q9HB03 270 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 CENPMQ9NSP4 180 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 TMEM100Q9NV29 134 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 ZMAT5Q9UDW3 170 aaKnown RBP13.79□□□□□ -0.2
SNX17-204ENST00000453453 BOD1L1Q8NFC6 3051 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 TRGV8A0A0C4DH27 118 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 MEGF11A6BM72 1044 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 SNAPINO95295 136 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 PVALBP20472 110 aaPredicted RBP13.79□□□□□ -0.2
SNX17-204ENST00000453453 ACHEP22303 614 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 ATPAF1Q5TC12 328 aaPredicted RBP13.79□□□□□ -0.2
SNX17-204ENST00000453453 RHOUQ7L0Q8 258 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 DPPA2Q7Z7J5 298 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 SLC25A42Q86VD7 318 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 OR51D1Q8NGF3 324 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 STARD4Q96DR4 205 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 SEH1LQ96EE3 360 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 ZNF471Q9BX82 626 aaPredicted RBP13.79□□□□□ -0.2
SNX17-204ENST00000453453 ITPR1Q14643 2758 aa13.79□□□□□ -0.2
SNX17-204ENST00000453453 E9PLN8 166 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 F8W036 122 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 ATXN7O15265 892 aaPredicted RBP13.78□□□□□ -0.2
SNX17-204ENST00000453453 RPP14O95059 124 aaKnown RBP13.78□□□□□ -0.2
SNX17-204ENST00000453453 MAS1P04201 325 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 ZNF735P0CB33 412 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 PAX6P26367 422 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 HSD11B1P28845 292 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 UBE2MP61081 183 aaKnown RBP13.78□□□□□ -0.2
SNX17-204ENST00000453453 GUCA2AQ02747 115 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms