RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 STARD5Q9NSY2 213 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 LNP1A1A4G5 178 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 TGFBR3LH3BV60 316 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 ZNF217O75362 1048 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 OR5AC1P0C628 307 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 DANCRP0C864 163 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 IGFBP4P22692 258 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 SOX8P57073 446 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 SLC35D2Q76EJ3 337 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 BCORP1Q8N888 145 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 ZNRF4Q8WWF5 429 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 OR10A5Q9H207 317 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 OR52A1Q9UKL2 312 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 PCDH15Q96QU1 1955 aa11.9□□□□□ -0.5
SYNGAP1-204ENST00000449372 METTL12A8MUP2 240 aa11.9□□□□□ -0.51
SYNGAP1-204ENST00000449372 NSA2O95478 260 aaKnown RBP11.9□□□□□ -0.51
SYNGAP1-204ENST00000449372 MBPP02686 304 aaPredicted RBP11.9□□□□□ -0.51
SYNGAP1-204ENST00000449372 NGFRP08138 427 aa11.9□□□□□ -0.51
SYNGAP1-204ENST00000449372 CHRM2P08172 466 aa11.9□□□□□ -0.51
SYNGAP1-204ENST00000449372 SLC35A1P78382 337 aa11.9□□□□□ -0.51
SYNGAP1-204ENST00000449372 RPL18Q07020 188 aaKnown RBP11.9□□□□□ -0.51
SYNGAP1-204ENST00000449372 PMPCAQ10713 525 aa11.9□□□□□ -0.51
SYNGAP1-204ENST00000449372 SLC9A3R2Q15599 337 aa11.9□□□□□ -0.51
SYNGAP1-204ENST00000449372 TMEM225Q6GV28 225 aa11.9□□□□□ -0.51
SYNGAP1-204ENST00000449372 DNAJC4Q9NNZ3 241 aa11.9□□□□□ -0.51
SYNGAP1-204ENST00000449372 PRR13Q9NZ81 148 aa11.9□□□□□ -0.51
SYNGAP1-204ENST00000449372 CBY3A6NI87 242 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 ABHD16AO95870 558 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 GAPDHP04406 335 aaKnown RBP11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 CTSEP14091 401 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 RPL12P30050 165 aaKnown RBP11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 IQCJQ1A5X6 159 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 GLYATL3Q5SZD4 288 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 ATG4DQ86TL0 474 aaPredicted RBP11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 OR10AC1Q8NH08 325 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 EXTL1Q92935 676 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 TPSD1Q9BZJ3 242 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 OR11A1Q9GZK7 315 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 RPH3ALQ9UNE2 315 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 A0A1B0GTH9 108 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 MED19A0JLT2 244 aaPredicted RBP11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 PRR32B1ATL7 298 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 FOXS1O43638 330 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 C1QL1O75973 258 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 SERPINA2P20848 420 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 CD27P26842 260 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 CDKN1BP46527 198 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 BLKP51451 505 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 IGLV3-21P80748 117 aaPredicted RBP11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 WDR38Q5JTN6 314 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 FAM185AQ8N0U4 392 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 C1orf87Q8N0U7 546 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 OR51A4Q8NGJ6 313 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 OR10C1Q96KK4 312 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 RAB18Q9NP72 206 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 H0YL77 283 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 IRF2P14316 349 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 FCGR2CP31995 323 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 GLIPR1P48060 266 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 RPL27P61353 136 aaKnown RBP11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 AADACL3Q5VUY0 350 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 MDGA2Q7Z553 956 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 TSTD1Q8NFU3 115 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 RNF166Q96A37 237 aaPredicted RBP11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 SLC41A2Q96JW4 573 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 SLC46A1Q96NT5 459 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 ADAMTS20P59510 1910 aa11.89□□□□□ -0.51
SYNGAP1-204ENST00000449372 SELEP16581 610 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 KLK2P20151 261 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 TMEM33P57088 247 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 H3F3AP84243 136 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 BATFQ16520 125 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 KCNMB1Q16558 191 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 OPN5Q6U736 354 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 SMIM15Q7Z3B0 74 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 EXD3Q8N9H8 876 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 MARCH1Q8TCQ1 289 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 TMEM234Q8WY98 164 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 RCC1LQ96I51 464 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 ELOVL1Q9BW60 279 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 TBL1XR1Q9BZK7 514 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 ULBP3Q9BZM4 244 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 GPR173Q9NS66 373 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 H3BMH7 237 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 HIKESHIQ53FT3 197 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 SSX7Q7RTT5 188 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 ZAR1Q86SH2 424 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 CADM4Q8NFZ8 388 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 OR1P1Q8NH06 330 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 LPAR4Q99677 370 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 NUDT16L1Q9BRJ7 211 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 TLCD2A6NGC4 264 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 CCDC85CA6NKD9 419 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 NXPH2O95156 264 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 BRS3P32247 399 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 CAPZBP47756 277 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 C1orf194Q5T5A4 169 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 RTL6Q6ICC9 239 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 TRAPPC6BQ86SZ2 158 aa11.88□□□□□ -0.51
SYNGAP1-204ENST00000449372 SLC22A24Q8N4F4 322 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms