RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 IL19Q9UHD0 177 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 ADAM30Q9UKF2 790 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 IGHV1-46P01743 117 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 INHBBP09529 407 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 TMEM225BP0DP42 221 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 TNFSF8P32971 234 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 UNC119Q13432 240 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 FAM209AQ5JX71 171 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 DTX2Q86UW9 622 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 MKXQ8IYA7 352 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 FBXL14Q8N1E6 418 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 RAB40AQ8WXH6 277 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 AQP3Q92482 292 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 CST11Q9H112 138 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 MS4A5Q9H3V2 200 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 AKIP1Q9NQ31 210 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 FAIMQ9NVQ4 179 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 RHBDL2Q9NX52 303 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 IGKV1-12A0A0C4DH73 117 aa16.34■□□□□ 0.21
RPS28-202ENST00000449223 SPRY1O43609 319 aaPredicted RBP16.34■□□□□ 0.21
RPS28-202ENST00000449223 KDM4BO94953 1096 aa16.34■□□□□ 0.21
RPS28-202ENST00000449223 IGKV1D-12P01611 117 aa16.34■□□□□ 0.21
RPS28-202ENST00000449223 ELP2Q6IA86 826 aa16.34■□□□□ 0.21
RPS28-202ENST00000449223 HAGHLQ6PII5 290 aaPredicted RBP16.34■□□□□ 0.21
RPS28-202ENST00000449223 SLC25A26Q70HW3 274 aa16.34■□□□□ 0.21
RPS28-202ENST00000449223 SCCPDHQ8NBX0 429 aa16.34■□□□□ 0.21
RPS28-202ENST00000449223 OR51F2Q8NH61 342 aa16.34■□□□□ 0.21
RPS28-202ENST00000449223 MRPS24Q96EL2 167 aaKnown RBP16.34■□□□□ 0.21
RPS28-202ENST00000449223 MEGF10Q96KG7 1140 aa16.34■□□□□ 0.21
RPS28-202ENST00000449223 S100A13Q99584 98 aa16.34■□□□□ 0.21
RPS28-202ENST00000449223 METTL9Q9H1A3 318 aa16.34■□□□□ 0.21
RPS28-202ENST00000449223 RAB22AQ9UL26 194 aa16.34■□□□□ 0.21
RPS28-202ENST00000449223 POLDIP2Q9Y2S7 368 aa16.34■□□□□ 0.21
RPS28-202ENST00000449223 DCHS2Q6V1P9 2916 aa16.33■□□□□ 0.2
RPS28-202ENST00000449223 DANCRP0C864 163 aa16.33■□□□□ 0.2
RPS28-202ENST00000449223 ELK1P19419 428 aa16.33■□□□□ 0.2
RPS28-202ENST00000449223 TNFSF4P23510 183 aa16.33■□□□□ 0.2
RPS28-202ENST00000449223 CFHR2P36980 270 aa16.33■□□□□ 0.2
RPS28-202ENST00000449223 SRP9P49458 86 aaKnown RBP16.33■□□□□ 0.2
RPS28-202ENST00000449223 ART1P52961 327 aa16.33■□□□□ 0.2
RPS28-202ENST00000449223 C11orf53Q8IXP5 236 aa16.33■□□□□ 0.2
RPS28-202ENST00000449223 S100ZQ8WXG8 99 aa16.33■□□□□ 0.2
RPS28-202ENST00000449223 ERGIC1Q969X5 290 aa16.33■□□□□ 0.2
RPS28-202ENST00000449223 POM121Q96HA1 1249 aa16.33■□□□□ 0.2
RPS28-202ENST00000449223 OR2V2Q96R30 315 aa16.33■□□□□ 0.2
RPS28-202ENST00000449223 KCNK15Q9H427 330 aa16.33■□□□□ 0.2
RPS28-202ENST00000449223 PCDHB16Q9NRJ7 776 aa16.33■□□□□ 0.2
RPS28-202ENST00000449223 UTP20O75691 2785 aaKnown RBP16.33■□□□□ 0.2
RPS28-202ENST00000449223 CHD3Q12873 2000 aaKnown RBP16.32■□□□□ 0.2
RPS28-202ENST00000449223 SPRY3O43610 288 aa16.32■□□□□ 0.2
RPS28-202ENST00000449223 ANGPTL7O43827 346 aa16.32■□□□□ 0.2
RPS28-202ENST00000449223 CDC14BO60729 498 aa16.32■□□□□ 0.2
RPS28-202ENST00000449223 NOS1APO75052 506 aaPredicted RBP16.32■□□□□ 0.2
RPS28-202ENST00000449223 CTAG2O75638 210 aa16.32■□□□□ 0.2
RPS28-202ENST00000449223 CYB5AP00167 134 aa16.32■□□□□ 0.2
RPS28-202ENST00000449223 EIF4EP06730 217 aaKnown RBP16.32■□□□□ 0.2
RPS28-202ENST00000449223 PPOXP50336 477 aa16.32■□□□□ 0.2
RPS28-202ENST00000449223 PLA2G7Q13093 441 aa16.32■□□□□ 0.2
RPS28-202ENST00000449223 FAM189A2Q15884 450 aa16.32■□□□□ 0.2
RPS28-202ENST00000449223 PCGF3Q3KNV8 242 aa16.32■□□□□ 0.2
RPS28-202ENST00000449223 C11orf71Q6IPW1 123 aa16.32■□□□□ 0.2
RPS28-202ENST00000449223 MFSD4AQ8N468 514 aa16.32■□□□□ 0.2
RPS28-202ENST00000449223 TMEM104Q8NE00 496 aa16.32■□□□□ 0.2
RPS28-202ENST00000449223 SOSTQ9BQB4 213 aa16.32■□□□□ 0.2
RPS28-202ENST00000449223 CBLN4Q9NTU7 201 aa16.32■□□□□ 0.2
RPS28-202ENST00000449223 MTCH1Q9NZJ7 389 aa16.32■□□□□ 0.2
RPS28-202ENST00000449223 A0A0A6YYH2 397 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 A6NJ64 397 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 SYNGR1O43759 233 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 TPPPO94811 219 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 BMP4P12644 408 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 EFNB2P52799 333 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 ERVK11-1P61568 191 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 SNRPD2P62316 118 aaKnown RBP16.31■□□□□ 0.2
RPS28-202ENST00000449223 TLE4Q04727 773 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 RSU1Q15404 277 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 TESK1Q15569 626 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 SLC22A6Q4U2R8 563 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 NHLRC3Q5JS37 347 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 AGAP6Q5VW22 663 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 OR10K2Q6IF99 312 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 METAP1DQ6UB28 335 aaPredicted RBP16.31■□□□□ 0.2
RPS28-202ENST00000449223 Q8IYB0 196 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 CMTM4Q8IZR5 234 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 DIRAS2Q96HU8 199 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 CEP19Q96LK0 163 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 NUDT16L1Q9BRJ7 211 aaKnown RBP16.31■□□□□ 0.2
RPS28-202ENST00000449223 TM2D1Q9BX74 207 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 TMEM59Q9BXS4 323 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 ING4Q9UNL4 249 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 LRBAP50851 2863 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 CACNA1DQ01668 2161 aa16.31■□□□□ 0.2
RPS28-202ENST00000449223 CDIPTO14735 213 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 SCGNO76038 276 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 PLATP00750 562 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 SFTPBP07988 381 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 PGA5P0DJD9 388 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 MGMTP16455 207 aa16.3■□□□□ 0.2
RPS28-202ENST00000449223 PTBP1P26599 531 aaKnown RBP eCLIP16.3■□□□□ 0.2
RPS28-202ENST00000449223 RPS27AP62979 156 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms